Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Foxc1Q61572 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Foxc1Q61572 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Foxc1Q61572 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.11□□□□□ -0.15
Foxc1Q61572 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC14.11□□□□□ -0.15
Foxc1Q61572 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Foxc1Q61572 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxc1Q61572 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Foxc1Q61572 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxc1Q61572 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Foxc1Q61572 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Foxc1Q61572 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Foxc1Q61572 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.1□□□□□ -0.15
Foxc1Q61572 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxc1Q61572 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxc1Q61572 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Foxc1Q61572 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Foxc1Q61572 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxc1Q61572 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxc1Q61572 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxc1Q61572 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Foxc1Q61572 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxc1Q61572 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxc1Q61572 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxc1Q61572 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Foxc1Q61572 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Foxc1Q61572 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.08□□□□□ -0.16
Foxc1Q61572 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxc1Q61572 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxc1Q61572 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxc1Q61572 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxc1Q61572 Gm12251-201ENSMUST00000117893 792 ntBASIC14.08□□□□□ -0.16
Foxc1Q61572 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Foxc1Q61572 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxc1Q61572 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxc1Q61572 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxc1Q61572 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.08□□□□□ -0.16
Foxc1Q61572 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxc1Q61572 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Foxc1Q61572 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.07□□□□□ -0.16
Foxc1Q61572 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Gm5874-201ENSMUST00000096101 508 ntBASIC14.07□□□□□ -0.16
Foxc1Q61572 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Foxc1Q61572 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Foxc1Q61572 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Foxc1Q61572 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.07□□□□□ -0.16
Foxc1Q61572 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxc1Q61572 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.06□□□□□ -0.16
Foxc1Q61572 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.06□□□□□ -0.16
Foxc1Q61572 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.06□□□□□ -0.16
Foxc1Q61572 Gm43173-201ENSMUST00000202246 593 ntBASIC14.06□□□□□ -0.16
Foxc1Q61572 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.06□□□□□ -0.16
Foxc1Q61572 Golph3-202ENSMUST00000226517 2359 ntBASIC14.06□□□□□ -0.16
Foxc1Q61572 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Foxc1Q61572 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.06□□□□□ -0.16
Foxc1Q61572 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.06□□□□□ -0.16
Foxc1Q61572 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxc1Q61572 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxc1Q61572 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms