Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf44Q3UHJ8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rnf44Q3UHJ8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf44Q3UHJ8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Rnf44Q3UHJ8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf44Q3UHJ8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
Rnf44Q3UHJ8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.72■□□□□ 0.59
Rnf44Q3UHJ8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rnf44Q3UHJ8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf44Q3UHJ8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf44Q3UHJ8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf44Q3UHJ8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.71■□□□□ 0.59
Rnf44Q3UHJ8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.71■□□□□ 0.59
Rnf44Q3UHJ8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.71■□□□□ 0.59
Rnf44Q3UHJ8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf44Q3UHJ8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf44Q3UHJ8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf44Q3UHJ8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf44Q3UHJ8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf44Q3UHJ8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rnf44Q3UHJ8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf44Q3UHJ8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.69■□□□□ 0.58
Rnf44Q3UHJ8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rnf44Q3UHJ8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf44Q3UHJ8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf44Q3UHJ8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Rnf44Q3UHJ8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.67■□□□□ 0.58
Rnf44Q3UHJ8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf44Q3UHJ8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf44Q3UHJ8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf44Q3UHJ8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf44Q3UHJ8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Rnf44Q3UHJ8 Gm27801-201ENSMUST00000184174 223 ntBASIC18.66■□□□□ 0.58
Rnf44Q3UHJ8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnf44Q3UHJ8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf44Q3UHJ8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf44Q3UHJ8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf44Q3UHJ8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rnf44Q3UHJ8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf44Q3UHJ8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf44Q3UHJ8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rnf44Q3UHJ8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.65■□□□□ 0.58
Rnf44Q3UHJ8 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.65■□□□□ 0.58
Rnf44Q3UHJ8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rnf44Q3UHJ8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf44Q3UHJ8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf44Q3UHJ8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf44Q3UHJ8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf44Q3UHJ8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf44Q3UHJ8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf44Q3UHJ8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf44Q3UHJ8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf44Q3UHJ8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf44Q3UHJ8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rnf44Q3UHJ8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf44Q3UHJ8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf44Q3UHJ8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf44Q3UHJ8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf44Q3UHJ8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf44Q3UHJ8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf44Q3UHJ8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms