Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rapgef1Q3UHC1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rapgef1Q3UHC1 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.12■□□□□ 0.97
Rapgef1Q3UHC1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rapgef1Q3UHC1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rapgef1Q3UHC1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rapgef1Q3UHC1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rapgef1Q3UHC1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rapgef1Q3UHC1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rapgef1Q3UHC1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rapgef1Q3UHC1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rapgef1Q3UHC1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Rapgef1Q3UHC1 Gm8495-201ENSMUST00000188740 694 ntBASIC21.1■□□□□ 0.97
Rapgef1Q3UHC1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Rapgef1Q3UHC1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Rapgef1Q3UHC1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rapgef1Q3UHC1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rapgef1Q3UHC1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rapgef1Q3UHC1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rapgef1Q3UHC1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.09■□□□□ 0.97
Rapgef1Q3UHC1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rapgef1Q3UHC1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rapgef1Q3UHC1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rapgef1Q3UHC1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rapgef1Q3UHC1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rapgef1Q3UHC1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rapgef1Q3UHC1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rapgef1Q3UHC1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rapgef1Q3UHC1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rapgef1Q3UHC1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rapgef1Q3UHC1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.08■□□□□ 0.97
Rapgef1Q3UHC1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.08■□□□□ 0.97
Rapgef1Q3UHC1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rapgef1Q3UHC1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Rapgef1Q3UHC1 Gm18284-201ENSMUST00000172604 624 ntBASIC21.08■□□□□ 0.97
Rapgef1Q3UHC1 Gm43017-201ENSMUST00000198296 752 ntBASIC21.08■□□□□ 0.97
Rapgef1Q3UHC1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rapgef1Q3UHC1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rapgef1Q3UHC1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.08■□□□□ 0.96
Rapgef1Q3UHC1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rapgef1Q3UHC1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rapgef1Q3UHC1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Rapgef1Q3UHC1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rapgef1Q3UHC1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
Rapgef1Q3UHC1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rapgef1Q3UHC1 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.07■□□□□ 0.96
Rapgef1Q3UHC1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
Rapgef1Q3UHC1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rapgef1Q3UHC1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rapgef1Q3UHC1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rapgef1Q3UHC1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rapgef1Q3UHC1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rapgef1Q3UHC1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Rapgef1Q3UHC1 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.06■□□□□ 0.96
Rapgef1Q3UHC1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rapgef1Q3UHC1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rapgef1Q3UHC1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rapgef1Q3UHC1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.05■□□□□ 0.96
Rapgef1Q3UHC1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
Rapgef1Q3UHC1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rapgef1Q3UHC1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rapgef1Q3UHC1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.05■□□□□ 0.96
Rapgef1Q3UHC1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rapgef1Q3UHC1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rapgef1Q3UHC1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rapgef1Q3UHC1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.03■□□□□ 0.96
Rapgef1Q3UHC1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rapgef1Q3UHC1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rapgef1Q3UHC1 Gm43173-201ENSMUST00000202246 593 ntBASIC21.03■□□□□ 0.96
Rapgef1Q3UHC1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rapgef1Q3UHC1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms