Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm44771-201ENSMUST00000206975 626 ntBASIC18.17■□□□□ 0.5
Spg11Q3UHA3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Spg11Q3UHA3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg11Q3UHA3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg11Q3UHA3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg11Q3UHA3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg11Q3UHA3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg11Q3UHA3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg11Q3UHA3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Spg11Q3UHA3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
Spg11Q3UHA3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Spg11Q3UHA3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg11Q3UHA3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Spg11Q3UHA3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg11Q3UHA3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg11Q3UHA3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg11Q3UHA3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg11Q3UHA3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Spg11Q3UHA3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg11Q3UHA3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Spg11Q3UHA3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg11Q3UHA3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg11Q3UHA3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg11Q3UHA3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.15■□□□□ 0.5
Spg11Q3UHA3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Spg11Q3UHA3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg11Q3UHA3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Spg11Q3UHA3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Spg11Q3UHA3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Spg11Q3UHA3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Spg11Q3UHA3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Spg11Q3UHA3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.14■□□□□ 0.49
Spg11Q3UHA3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Spg11Q3UHA3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Spg11Q3UHA3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg11Q3UHA3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Spg11Q3UHA3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg11Q3UHA3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.13■□□□□ 0.49
Spg11Q3UHA3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.13■□□□□ 0.49
Spg11Q3UHA3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg11Q3UHA3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg11Q3UHA3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.13■□□□□ 0.49
Spg11Q3UHA3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Spg11Q3UHA3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Spg11Q3UHA3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg11Q3UHA3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg11Q3UHA3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg11Q3UHA3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg11Q3UHA3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg11Q3UHA3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg11Q3UHA3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.12■□□□□ 0.49
Spg11Q3UHA3 Gm23634-201ENSMUST00000175071 91 ntBASIC18.12■□□□□ 0.49
Spg11Q3UHA3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg11Q3UHA3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg11Q3UHA3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.11■□□□□ 0.49
Spg11Q3UHA3 Gm2399-201ENSMUST00000104944 225 ntBASIC18.11■□□□□ 0.49
Spg11Q3UHA3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Spg11Q3UHA3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Spg11Q3UHA3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg11Q3UHA3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Spg11Q3UHA3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg11Q3UHA3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg11Q3UHA3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg11Q3UHA3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Spg11Q3UHA3 Gm7889-201ENSMUST00000185591 958 ntBASIC18.11■□□□□ 0.49
Spg11Q3UHA3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg11Q3UHA3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.11■□□□□ 0.49
Spg11Q3UHA3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.1■□□□□ 0.49
Spg11Q3UHA3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Spg11Q3UHA3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Spg11Q3UHA3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Spg11Q3UHA3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Spg11Q3UHA3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Spg11Q3UHA3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Spg11Q3UHA3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Spg11Q3UHA3 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.09■□□□□ 0.49
Spg11Q3UHA3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Spg11Q3UHA3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Spg11Q3UHA3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Spg11Q3UHA3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.09■□□□□ 0.49
Spg11Q3UHA3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.09■□□□□ 0.49
Spg11Q3UHA3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Spg11Q3UHA3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Spg11Q3UHA3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Spg11Q3UHA3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Spg11Q3UHA3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Spg11Q3UHA3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Spg11Q3UHA3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Spg11Q3UHA3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Spg11Q3UHA3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Spg11Q3UHA3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Spg11Q3UHA3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Spg11Q3UHA3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Spg11Q3UHA3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Spg11Q3UHA3 Mir6236-201ENSMUST00000184437 123 ntBASIC18.08■□□□□ 0.48
Spg11Q3UHA3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.08■□□□□ 0.48
Spg11Q3UHA3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Spg11Q3UHA3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Spg11Q3UHA3 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.07■□□□□ 0.48
Spg11Q3UHA3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms