Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm7284-201ENSMUST00000131667 944 ntBASIC17.63■□□□□ 0.41
Chd8Q09XV5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Gm7153-201ENSMUST00000117092 455 ntBASIC17.63■□□□□ 0.41
Chd8Q09XV5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.63■□□□□ 0.41
Chd8Q09XV5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chd8Q09XV5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Chd8Q09XV5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chd8Q09XV5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd8Q09XV5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.62■□□□□ 0.41
Chd8Q09XV5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd8Q09XV5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd8Q09XV5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Chd8Q09XV5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chd8Q09XV5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chd8Q09XV5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd8Q09XV5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd8Q09XV5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd8Q09XV5 Gm28033-201ENSMUST00000184224 96 ntBASIC17.61■□□□□ 0.41
Chd8Q09XV5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.61■□□□□ 0.41
Chd8Q09XV5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd8Q09XV5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chd8Q09XV5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.61■□□□□ 0.41
Chd8Q09XV5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chd8Q09XV5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.61■□□□□ 0.41
Chd8Q09XV5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd8Q09XV5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd8Q09XV5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd8Q09XV5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd8Q09XV5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd8Q09XV5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd8Q09XV5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Chd8Q09XV5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Chd8Q09XV5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd8Q09XV5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd8Q09XV5 Gm7063-201ENSMUST00000186840 981 ntBASIC17.59■□□□□ 0.41
Chd8Q09XV5 Gm43183-201ENSMUST00000200632 547 ntBASIC17.59■□□□□ 0.41
Chd8Q09XV5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.59■□□□□ 0.41
Chd8Q09XV5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd8Q09XV5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd8Q09XV5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chd8Q09XV5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chd8Q09XV5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.59■□□□□ 0.41
Chd8Q09XV5 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.59■□□□□ 0.41
Chd8Q09XV5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd8Q09XV5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chd8Q09XV5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Chd8Q09XV5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Chd8Q09XV5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chd8Q09XV5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
Chd8Q09XV5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd8Q09XV5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd8Q09XV5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Chd8Q09XV5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd8Q09XV5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chd8Q09XV5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Chd8Q09XV5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Gm21814-202ENSMUST00000203277 873 ntBASIC17.57■□□□□ 0.4
Chd8Q09XV5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd8Q09XV5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Gm2399-201ENSMUST00000104944 225 ntBASIC17.57■□□□□ 0.4
Chd8Q09XV5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd8Q09XV5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd8Q09XV5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.56■□□□□ 0.4
Chd8Q09XV5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd8Q09XV5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd8Q09XV5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd8Q09XV5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chd8Q09XV5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd8Q09XV5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.56■□□□□ 0.4
Chd8Q09XV5 Gm37935-201ENSMUST00000192012 982 ntBASIC17.56■□□□□ 0.4
Chd8Q09XV5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chd8Q09XV5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd8Q09XV5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd8Q09XV5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd8Q09XV5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd8Q09XV5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd8Q09XV5 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.55■□□□□ 0.4
Chd8Q09XV5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd8Q09XV5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd8Q09XV5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd8Q09XV5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms