Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Sox4Q06831 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Sox4Q06831 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox4Q06831 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.06■□□□□ 0.64
Sox4Q06831 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.06■□□□□ 0.64
Sox4Q06831 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox4Q06831 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox4Q06831 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox4Q06831 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.06■□□□□ 0.64
Sox4Q06831 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox4Q06831 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox4Q06831 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox4Q06831 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox4Q06831 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Sox4Q06831 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox4Q06831 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox4Q06831 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox4Q06831 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.05■□□□□ 0.64
Sox4Q06831 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.05■□□□□ 0.64
Sox4Q06831 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox4Q06831 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox4Q06831 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox4Q06831 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox4Q06831 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox4Q06831 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox4Q06831 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
Sox4Q06831 Gm5874-201ENSMUST00000096101 508 ntBASIC19.04■□□□□ 0.64
Sox4Q06831 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox4Q06831 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox4Q06831 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Sox4Q06831 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox4Q06831 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.03■□□□□ 0.64
Sox4Q06831 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox4Q06831 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox4Q06831 Gm10493-201ENSMUST00000097270 612 ntBASIC19.03■□□□□ 0.64
Sox4Q06831 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox4Q06831 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox4Q06831 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox4Q06831 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox4Q06831 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Sox4Q06831 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox4Q06831 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox4Q06831 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Sox4Q06831 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox4Q06831 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox4Q06831 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.02■□□□□ 0.64
Sox4Q06831 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox4Q06831 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox4Q06831 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox4Q06831 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Sox4Q06831 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox4Q06831 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox4Q06831 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox4Q06831 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox4Q06831 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox4Q06831 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sox4Q06831 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.01■□□□□ 0.63
Sox4Q06831 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Sox4Q06831 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox4Q06831 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sox4Q06831 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox4Q06831 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox4Q06831 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox4Q06831 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Sox4Q06831 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox4Q06831 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox4Q06831 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19■□□□□ 0.63
Sox4Q06831 Gm8495-201ENSMUST00000188740 694 ntBASIC19■□□□□ 0.63
Sox4Q06831 Gm9988-201ENSMUST00000069786 435 ntBASIC19■□□□□ 0.63
Sox4Q06831 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox4Q06831 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox4Q06831 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox4Q06831 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Sox4Q06831 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Sox4Q06831 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Sox4Q06831 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox4Q06831 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox4Q06831 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.99■□□□□ 0.63
Sox4Q06831 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.99■□□□□ 0.63
Sox4Q06831 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.99■□□□□ 0.63
Sox4Q06831 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.99■□□□□ 0.63
Sox4Q06831 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox4Q06831 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.99■□□□□ 0.63
Sox4Q06831 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sox4Q06831 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox4Q06831 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sox4Q06831 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sox4Q06831 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox4Q06831 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Sox4Q06831 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox4Q06831 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Sox4Q06831 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sox4Q06831 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sox4Q06831 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox4Q06831 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sox4Q06831 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox4Q06831 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sox4Q06831 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Sox4Q06831 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sox4Q06831 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms