Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H3f3aP84244 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H3f3aP84244 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3aP84244 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3aP84244 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
H3f3aP84244 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3aP84244 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3aP84244 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
H3f3aP84244 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.26■□□□□ 0.35
H3f3aP84244 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3aP84244 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3aP84244 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3aP84244 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3aP84244 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3aP84244 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3aP84244 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3aP84244 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H3f3aP84244 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H3f3aP84244 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.25■□□□□ 0.35
H3f3aP84244 Gm43060-201ENSMUST00000200621 289 ntBASIC17.25■□□□□ 0.35
H3f3aP84244 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3f3aP84244 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3f3aP84244 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3f3aP84244 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3f3aP84244 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
H3f3aP84244 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3f3aP84244 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.25■□□□□ 0.35
H3f3aP84244 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
H3f3aP84244 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H3f3aP84244 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3f3aP84244 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3aP84244 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3aP84244 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3aP84244 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3aP84244 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3aP84244 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.24■□□□□ 0.35
H3f3aP84244 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3aP84244 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.24■□□□□ 0.35
H3f3aP84244 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3aP84244 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
H3f3aP84244 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3aP84244 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3aP84244 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3aP84244 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3aP84244 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3aP84244 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
H3f3aP84244 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
H3f3aP84244 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.23■□□□□ 0.35
H3f3aP84244 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
H3f3aP84244 Gm40848-201ENSMUST00000221998 324 ntBASIC17.23■□□□□ 0.35
H3f3aP84244 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3aP84244 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3aP84244 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3aP84244 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3aP84244 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
H3f3aP84244 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3f3aP84244 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3f3aP84244 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3f3aP84244 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.22■□□□□ 0.35
H3f3aP84244 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.22■□□□□ 0.35
H3f3aP84244 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.22■□□□□ 0.35
H3f3aP84244 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.22■□□□□ 0.35
H3f3aP84244 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3f3aP84244 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3f3aP84244 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3f3aP84244 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3f3aP84244 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
H3f3aP84244 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3f3aP84244 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3f3aP84244 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H3f3aP84244 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
H3f3aP84244 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.21■□□□□ 0.35
H3f3aP84244 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
H3f3aP84244 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3f3aP84244 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3f3aP84244 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
H3f3aP84244 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Gm27801-201ENSMUST00000184174 223 ntBASIC17.2■□□□□ 0.34
H3f3aP84244 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3aP84244 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H3f3aP84244 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.19■□□□□ 0.34
H3f3aP84244 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
H3f3aP84244 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
H3f3aP84244 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H3f3aP84244 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.19■□□□□ 0.34
H3f3aP84244 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
H3f3aP84244 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
H3f3aP84244 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
H3f3aP84244 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms