Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Reep4-203ENSMUST00000226563 1444 ntBASIC20.26■□□□□ 0.83
Usp46P62069 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp46P62069 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp46P62069 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp46P62069 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp46P62069 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp46P62069 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp46P62069 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp46P62069 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp46P62069 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp46P62069 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp46P62069 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp46P62069 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp46P62069 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp46P62069 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Usp46P62069 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp46P62069 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp46P62069 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp46P62069 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp46P62069 AV356131-201ENSMUST00000206201 750 ntBASIC20.24■□□□□ 0.83
Usp46P62069 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.24■□□□□ 0.83
Usp46P62069 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp46P62069 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.24■□□□□ 0.83
Usp46P62069 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp46P62069 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp46P62069 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.23■□□□□ 0.83
Usp46P62069 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp46P62069 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp46P62069 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp46P62069 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.23■□□□□ 0.83
Usp46P62069 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp46P62069 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
Usp46P62069 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp46P62069 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp46P62069 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp46P62069 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Usp46P62069 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Usp46P62069 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
Usp46P62069 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp46P62069 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.22■□□□□ 0.83
Usp46P62069 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp46P62069 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp46P62069 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Usp46P62069 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp46P62069 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Usp46P62069 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Usp46P62069 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Usp46P62069 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Usp46P62069 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.21■□□□□ 0.83
Usp46P62069 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp46P62069 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp46P62069 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp46P62069 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Usp46P62069 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp46P62069 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.2■□□□□ 0.82
Usp46P62069 Gm29257-201ENSMUST00000186115 639 ntBASIC20.2■□□□□ 0.82
Usp46P62069 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.2■□□□□ 0.82
Usp46P62069 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp46P62069 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Usp46P62069 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp46P62069 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp46P62069 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp46P62069 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Usp46P62069 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp46P62069 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp46P62069 Gm13234-201ENSMUST00000120010 747 ntBASIC20.19■□□□□ 0.82
Usp46P62069 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.19■□□□□ 0.82
Usp46P62069 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp46P62069 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp46P62069 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp46P62069 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp46P62069 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp46P62069 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp46P62069 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp46P62069 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp46P62069 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp46P62069 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp46P62069 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp46P62069 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp46P62069 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp46P62069 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp46P62069 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp46P62069 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.18■□□□□ 0.82
Usp46P62069 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp46P62069 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp46P62069 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Usp46P62069 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp46P62069 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms