Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lim2P56563 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lim2P56563 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lim2P56563 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lim2P56563 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lim2P56563 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Lim2P56563 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lim2P56563 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.4■□□□□ 0.7
Lim2P56563 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lim2P56563 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.4■□□□□ 0.7
Lim2P56563 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lim2P56563 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lim2P56563 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lim2P56563 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lim2P56563 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.4■□□□□ 0.7
Lim2P56563 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lim2P56563 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lim2P56563 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.39■□□□□ 0.7
Lim2P56563 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lim2P56563 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lim2P56563 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lim2P56563 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lim2P56563 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Lim2P56563 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.39■□□□□ 0.69
Lim2P56563 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lim2P56563 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.39■□□□□ 0.69
Lim2P56563 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Lim2P56563 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lim2P56563 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lim2P56563 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lim2P56563 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lim2P56563 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lim2P56563 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lim2P56563 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lim2P56563 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lim2P56563 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lim2P56563 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Lim2P56563 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lim2P56563 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lim2P56563 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lim2P56563 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lim2P56563 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lim2P56563 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lim2P56563 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lim2P56563 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lim2P56563 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Lim2P56563 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lim2P56563 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lim2P56563 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lim2P56563 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.36■□□□□ 0.69
Lim2P56563 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.36■□□□□ 0.69
Lim2P56563 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lim2P56563 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Lim2P56563 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lim2P56563 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lim2P56563 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.35■□□□□ 0.69
Lim2P56563 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lim2P56563 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lim2P56563 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lim2P56563 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lim2P56563 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Lim2P56563 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lim2P56563 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.35■□□□□ 0.69
Lim2P56563 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lim2P56563 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lim2P56563 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lim2P56563 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lim2P56563 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lim2P56563 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lim2P56563 AA386476-201ENSMUST00000098781 1665 ntBASIC19.34■□□□□ 0.69
Lim2P56563 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lim2P56563 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.34■□□□□ 0.69
Lim2P56563 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lim2P56563 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.34■□□□□ 0.69
Lim2P56563 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lim2P56563 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lim2P56563 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lim2P56563 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lim2P56563 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lim2P56563 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lim2P56563 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lim2P56563 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Lim2P56563 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lim2P56563 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.33■□□□□ 0.69
Lim2P56563 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lim2P56563 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Lim2P56563 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.33■□□□□ 0.68
Lim2P56563 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.33■□□□□ 0.68
Lim2P56563 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.33■□□□□ 0.68
Lim2P56563 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lim2P56563 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lim2P56563 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Lim2P56563 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.32■□□□□ 0.68
Lim2P56563 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lim2P56563 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lim2P56563 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lim2P56563 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lim2P56563 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.32■□□□□ 0.68
Lim2P56563 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lim2P56563 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms