Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Msh6P54276 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Msh6P54276 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Msh6P54276 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Msh6P54276 Gm6802-201ENSMUST00000167843 1983 ntBASIC24.83■■□□□ 1.57
Msh6P54276 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Msh6P54276 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Msh6P54276 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Msh6P54276 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Msh6P54276 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
Msh6P54276 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC24.82■■□□□ 1.56
Msh6P54276 Gm43859-201ENSMUST00000200075 1412 ntBASIC24.82■■□□□ 1.56
Msh6P54276 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC24.82■■□□□ 1.56
Msh6P54276 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
Msh6P54276 Gm10252-201ENSMUST00000209541 832 ntBASIC24.82■■□□□ 1.56
Msh6P54276 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC24.82■■□□□ 1.56
Msh6P54276 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Msh6P54276 Hsf1-207ENSMUST00000228371 2102 ntBASIC24.82■■□□□ 1.56
Msh6P54276 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC24.82■■□□□ 1.56
Msh6P54276 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Msh6P54276 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Msh6P54276 Gm7290-201ENSMUST00000104990 617 ntBASIC24.81■■□□□ 1.56
Msh6P54276 Gm12918-201ENSMUST00000120234 636 ntBASIC24.81■■□□□ 1.56
Msh6P54276 Gm15710-201ENSMUST00000121821 636 ntBASIC24.81■■□□□ 1.56
Msh6P54276 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC24.81■■□□□ 1.56
Msh6P54276 Gm5075-201ENSMUST00000196916 622 ntBASIC24.81■■□□□ 1.56
Msh6P54276 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Msh6P54276 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Msh6P54276 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC24.81■■□□□ 1.56
Msh6P54276 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC24.81■■□□□ 1.56
Msh6P54276 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Msh6P54276 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Msh6P54276 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Msh6P54276 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Msh6P54276 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Msh6P54276 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Msh6P54276 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Msh6P54276 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Msh6P54276 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Msh6P54276 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Msh6P54276 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Msh6P54276 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Msh6P54276 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Msh6P54276 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Msh6P54276 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC24.8■■□□□ 1.56
Msh6P54276 Gm8520-201ENSMUST00000186517 868 ntBASIC24.8■■□□□ 1.56
Msh6P54276 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Msh6P54276 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Msh6P54276 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Msh6P54276 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Msh6P54276 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Msh6P54276 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Msh6P54276 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Msh6P54276 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Msh6P54276 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Msh6P54276 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Msh6P54276 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Msh6P54276 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC24.78■■□□□ 1.56
Msh6P54276 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC24.78■■□□□ 1.56
Msh6P54276 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
Msh6P54276 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Msh6P54276 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Msh6P54276 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Msh6P54276 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Msh6P54276 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Msh6P54276 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Msh6P54276 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC24.77■■□□□ 1.56
Msh6P54276 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Msh6P54276 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Msh6P54276 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Msh6P54276 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Msh6P54276 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.56
Msh6P54276 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Msh6P54276 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Msh6P54276 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC24.76■■□□□ 1.55
Msh6P54276 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC24.76■■□□□ 1.55
Msh6P54276 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC24.76■■□□□ 1.55
Msh6P54276 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Msh6P54276 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Msh6P54276 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Msh6P54276 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Msh6P54276 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Msh6P54276 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Msh6P54276 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC24.75■■□□□ 1.55
Msh6P54276 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Msh6P54276 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Msh6P54276 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Msh6P54276 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Msh6P54276 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC24.74■■□□□ 1.55
Msh6P54276 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Msh6P54276 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC24.74■■□□□ 1.55
Msh6P54276 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Msh6P54276 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Msh6P54276 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Msh6P54276 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Msh6P54276 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Msh6P54276 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC24.73■■□□□ 1.55
Msh6P54276 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC24.73■■□□□ 1.55
Msh6P54276 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Msh6P54276 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms