Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TubP50586 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TubP50586 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TubP50586 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TubP50586 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
TubP50586 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TubP50586 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TubP50586 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TubP50586 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TubP50586 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TubP50586 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TubP50586 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TubP50586 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TubP50586 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TubP50586 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TubP50586 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TubP50586 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TubP50586 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TubP50586 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
TubP50586 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TubP50586 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.86■□□□□ 0.77
TubP50586 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TubP50586 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TubP50586 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TubP50586 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
TubP50586 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TubP50586 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TubP50586 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TubP50586 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TubP50586 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.85■□□□□ 0.77
TubP50586 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TubP50586 Gm27801-201ENSMUST00000184174 223 ntBASIC19.85■□□□□ 0.77
TubP50586 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TubP50586 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TubP50586 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
TubP50586 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TubP50586 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TubP50586 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TubP50586 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.84■□□□□ 0.77
TubP50586 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.84■□□□□ 0.77
TubP50586 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TubP50586 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TubP50586 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TubP50586 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TubP50586 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TubP50586 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TubP50586 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TubP50586 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TubP50586 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TubP50586 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TubP50586 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TubP50586 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.83■□□□□ 0.77
TubP50586 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TubP50586 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TubP50586 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TubP50586 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TubP50586 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TubP50586 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
TubP50586 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TubP50586 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TubP50586 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TubP50586 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.82■□□□□ 0.76
TubP50586 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.82■□□□□ 0.76
TubP50586 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
TubP50586 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TubP50586 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TubP50586 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TubP50586 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TubP50586 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.81■□□□□ 0.76
TubP50586 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TubP50586 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TubP50586 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TubP50586 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TubP50586 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TubP50586 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TubP50586 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TubP50586 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TubP50586 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.8■□□□□ 0.76
TubP50586 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.8■□□□□ 0.76
TubP50586 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TubP50586 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.8■□□□□ 0.76
TubP50586 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TubP50586 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TubP50586 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.8■□□□□ 0.76
TubP50586 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TubP50586 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TubP50586 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TubP50586 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms