Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx2P48379 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.31■□□□□ 0.84
Rfx2P48379 Gm7291-201ENSMUST00000199147 382 ntBASIC20.31■□□□□ 0.84
Rfx2P48379 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.31■□□□□ 0.84
Rfx2P48379 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.3■□□□□ 0.84
Rfx2P48379 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rfx2P48379 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx2P48379 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rfx2P48379 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx2P48379 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx2P48379 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx2P48379 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx2P48379 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx2P48379 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx2P48379 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Rfx2P48379 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx2P48379 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.29■□□□□ 0.84
Rfx2P48379 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx2P48379 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx2P48379 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Rfx2P48379 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx2P48379 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx2P48379 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx2P48379 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.28■□□□□ 0.84
Rfx2P48379 Gm27405-201ENSMUST00000184201 112 ntBASIC20.28■□□□□ 0.84
Rfx2P48379 Gm42778-201ENSMUST00000199644 553 ntBASIC20.28■□□□□ 0.84
Rfx2P48379 Gm18671-201ENSMUST00000214826 683 ntBASIC20.28■□□□□ 0.84
Rfx2P48379 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfx2P48379 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.28■□□□□ 0.84
Rfx2P48379 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx2P48379 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Rfx2P48379 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx2P48379 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.27■□□□□ 0.84
Rfx2P48379 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx2P48379 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.27■□□□□ 0.84
Rfx2P48379 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rfx2P48379 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.27■□□□□ 0.83
Rfx2P48379 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rfx2P48379 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rfx2P48379 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rfx2P48379 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx2P48379 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rfx2P48379 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.26■□□□□ 0.83
Rfx2P48379 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.26■□□□□ 0.83
Rfx2P48379 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx2P48379 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx2P48379 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx2P48379 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Rfx2P48379 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx2P48379 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx2P48379 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx2P48379 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx2P48379 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx2P48379 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx2P48379 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.25■□□□□ 0.83
Rfx2P48379 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx2P48379 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx2P48379 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx2P48379 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx2P48379 Gm26571-201ENSMUST00000181399 666 ntBASIC20.25■□□□□ 0.83
Rfx2P48379 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.25■□□□□ 0.83
Rfx2P48379 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx2P48379 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx2P48379 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx2P48379 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rfx2P48379 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx2P48379 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx2P48379 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx2P48379 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx2P48379 Gm10849-201ENSMUST00000100397 618 ntBASIC20.24■□□□□ 0.83
Rfx2P48379 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Rfx2P48379 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rfx2P48379 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rfx2P48379 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx2P48379 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Rfx2P48379 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx2P48379 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rfx2P48379 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rfx2P48379 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx2P48379 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.23■□□□□ 0.83
Rfx2P48379 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Rfx2P48379 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.23■□□□□ 0.83
Rfx2P48379 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rfx2P48379 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.23■□□□□ 0.83
Rfx2P48379 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx2P48379 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx2P48379 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx2P48379 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx2P48379 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx2P48379 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx2P48379 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx2P48379 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rfx2P48379 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx2P48379 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx2P48379 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.22■□□□□ 0.83
Rfx2P48379 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.22■□□□□ 0.83
Rfx2P48379 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.22■□□□□ 0.83
Rfx2P48379 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rfx2P48379 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx2P48379 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms