Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.34■□□□□ 0.53
Slc6a11P31650 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a11P31650 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc6a11P31650 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a11P31650 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a11P31650 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a11P31650 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a11P31650 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a11P31650 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a11P31650 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a11P31650 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.33■□□□□ 0.52
Slc6a11P31650 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a11P31650 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a11P31650 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a11P31650 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a11P31650 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a11P31650 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Slc6a11P31650 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a11P31650 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slc6a11P31650 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a11P31650 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a11P31650 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.32■□□□□ 0.52
Slc6a11P31650 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc6a11P31650 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Slc6a11P31650 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc6a11P31650 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Slc6a11P31650 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a11P31650 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a11P31650 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.31■□□□□ 0.52
Slc6a11P31650 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Slc6a11P31650 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a11P31650 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
Slc6a11P31650 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slc6a11P31650 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a11P31650 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a11P31650 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a11P31650 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a11P31650 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc6a11P31650 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a11P31650 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a11P31650 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Slc6a11P31650 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.3■□□□□ 0.52
Slc6a11P31650 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.3■□□□□ 0.52
Slc6a11P31650 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a11P31650 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a11P31650 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a11P31650 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc6a11P31650 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.3■□□□□ 0.52
Slc6a11P31650 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a11P31650 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a11P31650 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Slc6a11P31650 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.29■□□□□ 0.52
Slc6a11P31650 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Slc6a11P31650 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a11P31650 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slc6a11P31650 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a11P31650 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a11P31650 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.28■□□□□ 0.52
Slc6a11P31650 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc6a11P31650 Gm6139-201ENSMUST00000079261 882 ntBASIC18.28■□□□□ 0.52
Slc6a11P31650 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Slc6a11P31650 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a11P31650 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a11P31650 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc6a11P31650 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a11P31650 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Slc6a11P31650 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a11P31650 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a11P31650 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a11P31650 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a11P31650 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a11P31650 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a11P31650 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.27■□□□□ 0.52
Slc6a11P31650 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Slc6a11P31650 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Slc6a11P31650 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a11P31650 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.27■□□□□ 0.52
Slc6a11P31650 Gm9870-201ENSMUST00000063874 645 ntBASIC18.27■□□□□ 0.52
Slc6a11P31650 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a11P31650 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a11P31650 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a11P31650 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.27■□□□□ 0.51
Slc6a11P31650 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Slc6a11P31650 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Slc6a11P31650 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a11P31650 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a11P31650 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Slc6a11P31650 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms