Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.95■□□□□ 0.46
Tnfrsf1bP25119 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf1bP25119 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf1bP25119 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tnfrsf1bP25119 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1bP25119 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1bP25119 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf1bP25119 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1bP25119 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1bP25119 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.93■□□□□ 0.46
Tnfrsf1bP25119 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1bP25119 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1bP25119 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1bP25119 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1bP25119 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf1bP25119 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf1bP25119 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf1bP25119 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Tnfrsf1bP25119 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Tnfrsf1bP25119 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf1bP25119 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Tnfrsf1bP25119 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf1bP25119 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf1bP25119 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf1bP25119 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf1bP25119 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf1bP25119 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf1bP25119 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Tnfrsf1bP25119 Gm27801-201ENSMUST00000184174 223 ntBASIC17.9■□□□□ 0.46
Tnfrsf1bP25119 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Tnfrsf1bP25119 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1bP25119 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Tnfrsf1bP25119 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Tnfrsf1bP25119 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1bP25119 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1bP25119 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1bP25119 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Tnfrsf1bP25119 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.87■□□□□ 0.45
Tnfrsf1bP25119 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1bP25119 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.87■□□□□ 0.45
Tnfrsf1bP25119 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Tnfrsf1bP25119 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1bP25119 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1bP25119 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1bP25119 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf1bP25119 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms