Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sod1P08228 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sod1P08228 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sod1P08228 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sod1P08228 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sod1P08228 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sod1P08228 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sod1P08228 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sod1P08228 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sod1P08228 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.39■□□□□ 0.53
Sod1P08228 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sod1P08228 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sod1P08228 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sod1P08228 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sod1P08228 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sod1P08228 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sod1P08228 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sod1P08228 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.38■□□□□ 0.53
Sod1P08228 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sod1P08228 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sod1P08228 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sod1P08228 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sod1P08228 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sod1P08228 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sod1P08228 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sod1P08228 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Sod1P08228 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sod1P08228 Gm22240-201ENSMUST00000175225 82 ntBASIC18.37■□□□□ 0.53
Sod1P08228 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sod1P08228 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sod1P08228 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sod1P08228 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sod1P08228 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Sod1P08228 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sod1P08228 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sod1P08228 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.36■□□□□ 0.53
Sod1P08228 Gm26524-201ENSMUST00000192339 390 ntBASIC18.36■□□□□ 0.53
Sod1P08228 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.36■□□□□ 0.53
Sod1P08228 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sod1P08228 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sod1P08228 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sod1P08228 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sod1P08228 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Sod1P08228 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sod1P08228 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.36■□□□□ 0.53
Sod1P08228 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sod1P08228 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.35■□□□□ 0.53
Sod1P08228 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.35■□□□□ 0.53
Sod1P08228 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sod1P08228 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Sod1P08228 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Sod1P08228 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sod1P08228 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.35■□□□□ 0.53
Sod1P08228 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Sod1P08228 Gm8520-201ENSMUST00000186517 868 ntBASIC18.35■□□□□ 0.53
Sod1P08228 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sod1P08228 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sod1P08228 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sod1P08228 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sod1P08228 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sod1P08228 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sod1P08228 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sod1P08228 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sod1P08228 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sod1P08228 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sod1P08228 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sod1P08228 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sod1P08228 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.33■□□□□ 0.53
Sod1P08228 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.33■□□□□ 0.53
Sod1P08228 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sod1P08228 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sod1P08228 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sod1P08228 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sod1P08228 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Sod1P08228 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sod1P08228 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.33■□□□□ 0.52
Sod1P08228 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.33■□□□□ 0.52
Sod1P08228 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Sod1P08228 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sod1P08228 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Sod1P08228 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.33■□□□□ 0.52
Sod1P08228 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.33■□□□□ 0.52
Sod1P08228 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sod1P08228 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sod1P08228 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.32■□□□□ 0.52
Sod1P08228 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.32■□□□□ 0.52
Sod1P08228 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sod1P08228 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Sod1P08228 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sod1P08228 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sod1P08228 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sod1P08228 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sod1P08228 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.31■□□□□ 0.52
Sod1P08228 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sod1P08228 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sod1P08228 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sod1P08228 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sod1P08228 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sod1P08228 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sod1P08228 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms