Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a2P08122 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.32■□□□□ 0.52
Col4a2P08122 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a2P08122 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.32■□□□□ 0.52
Col4a2P08122 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col4a2P08122 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Col4a2P08122 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a2P08122 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.31■□□□□ 0.52
Col4a2P08122 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Col4a2P08122 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.31■□□□□ 0.52
Col4a2P08122 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a2P08122 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.31■□□□□ 0.52
Col4a2P08122 Gm38205-201ENSMUST00000192243 258 ntBASIC18.31■□□□□ 0.52
Col4a2P08122 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a2P08122 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a2P08122 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.3■□□□□ 0.52
Col4a2P08122 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a2P08122 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Col4a2P08122 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a2P08122 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col4a2P08122 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a2P08122 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a2P08122 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.29■□□□□ 0.52
Col4a2P08122 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.29■□□□□ 0.52
Col4a2P08122 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.29■□□□□ 0.52
Col4a2P08122 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.29■□□□□ 0.52
Col4a2P08122 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Col4a2P08122 Gm13534-201ENSMUST00000121169 513 ntBASIC18.29■□□□□ 0.52
Col4a2P08122 Gm10252-201ENSMUST00000209541 832 ntBASIC18.29■□□□□ 0.52
Col4a2P08122 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a2P08122 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a2P08122 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a2P08122 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.28■□□□□ 0.52
Col4a2P08122 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col4a2P08122 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a2P08122 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Col4a2P08122 Gm8520-201ENSMUST00000186517 868 ntBASIC18.28■□□□□ 0.52
Col4a2P08122 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a2P08122 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col4a2P08122 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Col4a2P08122 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a2P08122 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a2P08122 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a2P08122 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Col4a2P08122 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.27■□□□□ 0.52
Col4a2P08122 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a2P08122 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Col4a2P08122 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.27■□□□□ 0.52
Col4a2P08122 Gm20049-201ENSMUST00000219950 730 ntBASIC18.27■□□□□ 0.52
Col4a2P08122 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a2P08122 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col4a2P08122 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 Gm22240-201ENSMUST00000175225 82 ntBASIC18.26■□□□□ 0.51
Col4a2P08122 Gm6420-201ENSMUST00000193885 723 ntBASIC18.26■□□□□ 0.51
Col4a2P08122 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Col4a2P08122 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.26■□□□□ 0.51
Col4a2P08122 Gm13168-201ENSMUST00000121771 632 ntBASIC18.26■□□□□ 0.51
Col4a2P08122 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.26■□□□□ 0.51
Col4a2P08122 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.26■□□□□ 0.51
Col4a2P08122 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.26■□□□□ 0.51
Col4a2P08122 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a2P08122 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a2P08122 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a2P08122 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Col4a2P08122 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a2P08122 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a2P08122 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.25■□□□□ 0.51
Col4a2P08122 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a2P08122 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a2P08122 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.25■□□□□ 0.51
Col4a2P08122 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a2P08122 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Col4a2P08122 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a2P08122 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a2P08122 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a2P08122 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a2P08122 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.25■□□□□ 0.51
Col4a2P08122 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a2P08122 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a2P08122 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a2P08122 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a2P08122 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a2P08122 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
Col4a2P08122 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.24■□□□□ 0.51
Col4a2P08122 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a2P08122 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Col4a2P08122 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a2P08122 Mir7071-201ENSMUST00000184847 69 ntBASIC18.24■□□□□ 0.51
Col4a2P08122 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms