Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxa3P02831 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Hoxa3P02831 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa3P02831 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa3P02831 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Hoxa3P02831 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa3P02831 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa3P02831 Gm42642-201ENSMUST00000200683 355 ntBASIC16.19■□□□□ 0.18
Hoxa3P02831 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa3P02831 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa3P02831 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa3P02831 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.19■□□□□ 0.18
Hoxa3P02831 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa3P02831 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa3P02831 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hoxa3P02831 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.19■□□□□ 0.18
Hoxa3P02831 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Hoxa3P02831 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa3P02831 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hoxa3P02831 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hoxa3P02831 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hoxa3P02831 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa3P02831 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa3P02831 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa3P02831 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa3P02831 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa3P02831 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa3P02831 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa3P02831 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa3P02831 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hoxa3P02831 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa3P02831 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Hoxa3P02831 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa3P02831 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa3P02831 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.17■□□□□ 0.18
Hoxa3P02831 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa3P02831 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.17■□□□□ 0.18
Hoxa3P02831 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa3P02831 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa3P02831 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa3P02831 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa3P02831 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa3P02831 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa3P02831 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.17■□□□□ 0.18
Hoxa3P02831 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Hoxa3P02831 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa3P02831 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.16■□□□□ 0.18
Hoxa3P02831 Gm7291-201ENSMUST00000199147 382 ntBASIC16.16■□□□□ 0.18
Hoxa3P02831 Gm42569-201ENSMUST00000200539 472 ntBASIC16.16■□□□□ 0.18
Hoxa3P02831 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.16■□□□□ 0.18
Hoxa3P02831 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Hoxa3P02831 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa3P02831 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa3P02831 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa3P02831 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa3P02831 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.15■□□□□ 0.18
Hoxa3P02831 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa3P02831 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa3P02831 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Hoxa3P02831 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa3P02831 Gm10033-202ENSMUST00000211874 928 ntBASIC16.15■□□□□ 0.18
Hoxa3P02831 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa3P02831 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa3P02831 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hoxa3P02831 Golph3-202ENSMUST00000226517 2359 ntBASIC16.15■□□□□ 0.18
Hoxa3P02831 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hoxa3P02831 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa3P02831 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Hoxa3P02831 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxa3P02831 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxa3P02831 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxa3P02831 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxa3P02831 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.14■□□□□ 0.17
Hoxa3P02831 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxa3P02831 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxa3P02831 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxa3P02831 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxa3P02831 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxa3P02831 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxa3P02831 Gm27405-201ENSMUST00000184201 112 ntBASIC16.13■□□□□ 0.17
Hoxa3P02831 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxa3P02831 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxa3P02831 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxa3P02831 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxa3P02831 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxa3P02831 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxa3P02831 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.13■□□□□ 0.17
Hoxa3P02831 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxa3P02831 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxa3P02831 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxa3P02831 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Hoxa3P02831 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxa3P02831 Gm29257-201ENSMUST00000186115 639 ntBASIC16.12■□□□□ 0.17
Hoxa3P02831 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.12■□□□□ 0.17
Hoxa3P02831 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxa3P02831 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxa3P02831 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxa3P02831 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hoxa3P02831 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxa3P02831 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms