Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcr3O88410 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcr3O88410 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcr3O88410 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.45■□□□□ 0.7
Cxcr3O88410 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcr3O88410 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcr3O88410 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcr3O88410 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.44■□□□□ 0.7
Cxcr3O88410 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.44■□□□□ 0.7
Cxcr3O88410 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcr3O88410 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcr3O88410 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcr3O88410 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcr3O88410 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcr3O88410 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcr3O88410 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Cxcr3O88410 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.43■□□□□ 0.7
Cxcr3O88410 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcr3O88410 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcr3O88410 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcr3O88410 Gm29257-201ENSMUST00000186115 639 ntBASIC19.43■□□□□ 0.7
Cxcr3O88410 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
Cxcr3O88410 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cxcr3O88410 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.43■□□□□ 0.7
Cxcr3O88410 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcr3O88410 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcr3O88410 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcr3O88410 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcr3O88410 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cxcr3O88410 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcr3O88410 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Cxcr3O88410 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cxcr3O88410 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Cxcr3O88410 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcr3O88410 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcr3O88410 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcr3O88410 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcr3O88410 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Cxcr3O88410 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcr3O88410 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcr3O88410 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcr3O88410 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcr3O88410 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcr3O88410 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcr3O88410 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcr3O88410 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcr3O88410 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcr3O88410 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcr3O88410 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcr3O88410 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcr3O88410 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.41■□□□□ 0.7
Cxcr3O88410 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.41■□□□□ 0.7
Cxcr3O88410 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcr3O88410 Gm27801-201ENSMUST00000184174 223 ntBASIC19.41■□□□□ 0.7
Cxcr3O88410 Gm7291-201ENSMUST00000199147 382 ntBASIC19.41■□□□□ 0.7
Cxcr3O88410 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cxcr3O88410 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.4■□□□□ 0.7
Cxcr3O88410 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcr3O88410 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcr3O88410 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcr3O88410 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcr3O88410 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcr3O88410 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.4■□□□□ 0.7
Cxcr3O88410 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcr3O88410 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcr3O88410 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.39■□□□□ 0.7
Cxcr3O88410 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Cxcr3O88410 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.39■□□□□ 0.69
Cxcr3O88410 Gm42642-201ENSMUST00000200683 355 ntBASIC19.39■□□□□ 0.69
Cxcr3O88410 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.39■□□□□ 0.69
Cxcr3O88410 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcr3O88410 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcr3O88410 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcr3O88410 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcr3O88410 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cxcr3O88410 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cxcr3O88410 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cxcr3O88410 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cxcr3O88410 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cxcr3O88410 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.38■□□□□ 0.69
Cxcr3O88410 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.38■□□□□ 0.69
Cxcr3O88410 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.38■□□□□ 0.69
Cxcr3O88410 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.38■□□□□ 0.69
Cxcr3O88410 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cxcr3O88410 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Cxcr3O88410 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcr3O88410 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcr3O88410 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcr3O88410 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.37■□□□□ 0.69
Cxcr3O88410 Gm26571-201ENSMUST00000181399 666 ntBASIC19.37■□□□□ 0.69
Cxcr3O88410 Gm42569-201ENSMUST00000200539 472 ntBASIC19.37■□□□□ 0.69
Cxcr3O88410 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cxcr3O88410 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cxcr3O88410 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcr3O88410 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cxcr3O88410 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcr3O88410 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcr3O88410 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.36■□□□□ 0.69
Cxcr3O88410 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cxcr3O88410 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms