Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim1O70400 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim1O70400 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim1O70400 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim1O70400 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim1O70400 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim1O70400 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim1O70400 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim1O70400 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim1O70400 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.14■□□□□ 0.66
Pdlim1O70400 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.14■□□□□ 0.66
Pdlim1O70400 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim1O70400 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.14■□□□□ 0.65
Pdlim1O70400 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.14■□□□□ 0.65
Pdlim1O70400 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim1O70400 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pdlim1O70400 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.14■□□□□ 0.65
Pdlim1O70400 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim1O70400 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim1O70400 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Pdlim1O70400 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pdlim1O70400 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim1O70400 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim1O70400 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim1O70400 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim1O70400 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pdlim1O70400 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim1O70400 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim1O70400 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim1O70400 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim1O70400 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim1O70400 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Pdlim1O70400 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim1O70400 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim1O70400 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim1O70400 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pdlim1O70400 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim1O70400 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Pdlim1O70400 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim1O70400 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.11■□□□□ 0.65
Pdlim1O70400 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.11■□□□□ 0.65
Pdlim1O70400 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim1O70400 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Pdlim1O70400 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim1O70400 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim1O70400 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim1O70400 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pdlim1O70400 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pdlim1O70400 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Pdlim1O70400 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim1O70400 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.1■□□□□ 0.65
Pdlim1O70400 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.1■□□□□ 0.65
Pdlim1O70400 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim1O70400 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim1O70400 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim1O70400 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim1O70400 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim1O70400 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim1O70400 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.09■□□□□ 0.65
Pdlim1O70400 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim1O70400 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Pdlim1O70400 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.09■□□□□ 0.65
Pdlim1O70400 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim1O70400 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.09■□□□□ 0.65
Pdlim1O70400 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim1O70400 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim1O70400 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim1O70400 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim1O70400 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim1O70400 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim1O70400 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Pdlim1O70400 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim1O70400 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.08■□□□□ 0.65
Pdlim1O70400 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.08■□□□□ 0.64
Pdlim1O70400 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.08■□□□□ 0.64
Pdlim1O70400 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim1O70400 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim1O70400 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim1O70400 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim1O70400 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim1O70400 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim1O70400 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim1O70400 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim1O70400 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim1O70400 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pdlim1O70400 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim1O70400 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim1O70400 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim1O70400 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim1O70400 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pdlim1O70400 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim1O70400 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.06■□□□□ 0.64
Pdlim1O70400 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim1O70400 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim1O70400 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim1O70400 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim1O70400 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim1O70400 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim1O70400 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
Pdlim1O70400 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms