Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Pdlim3O70209 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim3O70209 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim3O70209 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim3O70209 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim3O70209 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim3O70209 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim3O70209 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim3O70209 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim3O70209 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim3O70209 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim3O70209 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim3O70209 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim3O70209 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pdlim3O70209 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim3O70209 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim3O70209 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.52■□□□□ 0.4
Pdlim3O70209 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.52■□□□□ 0.4
Pdlim3O70209 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim3O70209 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim3O70209 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim3O70209 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Pdlim3O70209 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.52■□□□□ 0.39
Pdlim3O70209 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim3O70209 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim3O70209 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim3O70209 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim3O70209 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Pdlim3O70209 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim3O70209 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim3O70209 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim3O70209 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.51■□□□□ 0.39
Pdlim3O70209 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.51■□□□□ 0.39
Pdlim3O70209 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim3O70209 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim3O70209 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim3O70209 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim3O70209 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim3O70209 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Pdlim3O70209 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim3O70209 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim3O70209 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
Pdlim3O70209 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.5■□□□□ 0.39
Pdlim3O70209 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.5■□□□□ 0.39
Pdlim3O70209 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim3O70209 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pdlim3O70209 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim3O70209 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pdlim3O70209 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pdlim3O70209 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim3O70209 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim3O70209 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pdlim3O70209 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim3O70209 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim3O70209 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim3O70209 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pdlim3O70209 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim3O70209 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim3O70209 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim3O70209 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim3O70209 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim3O70209 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim3O70209 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim3O70209 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim3O70209 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim3O70209 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.49■□□□□ 0.39
Pdlim3O70209 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim3O70209 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.49■□□□□ 0.39
Pdlim3O70209 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim3O70209 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pdlim3O70209 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pdlim3O70209 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim3O70209 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim3O70209 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pdlim3O70209 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim3O70209 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim3O70209 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim3O70209 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pdlim3O70209 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim3O70209 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim3O70209 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim3O70209 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim3O70209 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim3O70209 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.48■□□□□ 0.39
Pdlim3O70209 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pdlim3O70209 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim3O70209 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.48■□□□□ 0.39
Pdlim3O70209 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim3O70209 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Pdlim3O70209 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pdlim3O70209 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim3O70209 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.47■□□□□ 0.39
Pdlim3O70209 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pdlim3O70209 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim3O70209 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pdlim3O70209 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.47■□□□□ 0.39
Pdlim3O70209 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim3O70209 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim3O70209 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim3O70209 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms