Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Limk2O54785 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Limk2O54785 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Limk2O54785 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Limk2O54785 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Limk2O54785 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Limk2O54785 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Limk2O54785 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Limk2O54785 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Limk2O54785 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Limk2O54785 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.7■□□□□ 0.74
Limk2O54785 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Limk2O54785 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.7■□□□□ 0.74
Limk2O54785 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Limk2O54785 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.7■□□□□ 0.74
Limk2O54785 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Limk2O54785 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Limk2O54785 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.7■□□□□ 0.74
Limk2O54785 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.69■□□□□ 0.74
Limk2O54785 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk2O54785 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk2O54785 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk2O54785 Gm10849-201ENSMUST00000100397 618 ntBASIC19.69■□□□□ 0.74
Limk2O54785 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk2O54785 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Limk2O54785 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk2O54785 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk2O54785 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Limk2O54785 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.69■□□□□ 0.74
Limk2O54785 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk2O54785 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk2O54785 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.69■□□□□ 0.74
Limk2O54785 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Limk2O54785 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Limk2O54785 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Limk2O54785 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Limk2O54785 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Limk2O54785 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Limk2O54785 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Limk2O54785 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.68■□□□□ 0.74
Limk2O54785 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.68■□□□□ 0.74
Limk2O54785 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Limk2O54785 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.68■□□□□ 0.74
Limk2O54785 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Limk2O54785 Notumos-201ENSMUST00000151998 2659 ntBASIC19.68■□□□□ 0.74
Limk2O54785 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Limk2O54785 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Limk2O54785 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Limk2O54785 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Limk2O54785 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Limk2O54785 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Limk2O54785 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Limk2O54785 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Limk2O54785 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Limk2O54785 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Limk2O54785 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.65■□□□□ 0.74
Limk2O54785 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Limk2O54785 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Limk2O54785 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Limk2O54785 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Limk2O54785 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Limk2O54785 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Limk2O54785 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Limk2O54785 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Limk2O54785 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Limk2O54785 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Limk2O54785 Gm11421-201ENSMUST00000122124 294 ntBASIC19.64■□□□□ 0.73
Limk2O54785 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.64■□□□□ 0.73
Limk2O54785 Gm37179-201ENSMUST00000194862 823 ntBASIC19.64■□□□□ 0.73
Limk2O54785 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.64■□□□□ 0.73
Limk2O54785 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Limk2O54785 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Limk2O54785 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Limk2O54785 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Limk2O54785 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Limk2O54785 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Limk2O54785 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Limk2O54785 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Limk2O54785 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Limk2O54785 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Limk2O54785 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.63■□□□□ 0.73
Limk2O54785 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.63■□□□□ 0.73
Limk2O54785 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Limk2O54785 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Limk2O54785 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Limk2O54785 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.63■□□□□ 0.73
Limk2O54785 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Limk2O54785 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Limk2O54785 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.62■□□□□ 0.73
Limk2O54785 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Limk2O54785 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Limk2O54785 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Limk2O54785 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Limk2O54785 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Limk2O54785 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Limk2O54785 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.62■□□□□ 0.73
Limk2O54785 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Limk2O54785 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Limk2O54785 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Limk2O54785 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms