Protein–RNA interactions for Protein: O35902

Dsg3, Desmoglein-3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dsg3O35902 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dsg3O35902 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dsg3O35902 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dsg3O35902 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.7■□□□□ 0.9
Dsg3O35902 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.7■□□□□ 0.9
Dsg3O35902 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dsg3O35902 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Dsg3O35902 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.69■□□□□ 0.9
Dsg3O35902 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dsg3O35902 Gm22240-201ENSMUST00000175225 82 ntBASIC20.69■□□□□ 0.9
Dsg3O35902 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Dsg3O35902 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dsg3O35902 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Dsg3O35902 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Dsg3O35902 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dsg3O35902 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dsg3O35902 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Dsg3O35902 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.68■□□□□ 0.9
Dsg3O35902 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dsg3O35902 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Dsg3O35902 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Dsg3O35902 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dsg3O35902 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dsg3O35902 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Dsg3O35902 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dsg3O35902 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dsg3O35902 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.67■□□□□ 0.9
Dsg3O35902 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.67■□□□□ 0.9
Dsg3O35902 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dsg3O35902 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Dsg3O35902 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dsg3O35902 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dsg3O35902 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dsg3O35902 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dsg3O35902 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dsg3O35902 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dsg3O35902 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.66■□□□□ 0.9
Dsg3O35902 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Dsg3O35902 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dsg3O35902 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dsg3O35902 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dsg3O35902 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Dsg3O35902 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Dsg3O35902 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dsg3O35902 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.65■□□□□ 0.9
Dsg3O35902 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.65■□□□□ 0.9
Dsg3O35902 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dsg3O35902 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dsg3O35902 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.65■□□□□ 0.9
Dsg3O35902 Gm10252-201ENSMUST00000209541 832 ntBASIC20.65■□□□□ 0.9
Dsg3O35902 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dsg3O35902 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dsg3O35902 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dsg3O35902 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dsg3O35902 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dsg3O35902 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dsg3O35902 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dsg3O35902 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dsg3O35902 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dsg3O35902 Gm12527-201ENSMUST00000117967 564 ntBASIC20.64■□□□□ 0.89
Dsg3O35902 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dsg3O35902 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Dsg3O35902 Gm20760-201ENSMUST00000179197 648 ntBASIC20.64■□□□□ 0.89
Dsg3O35902 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dsg3O35902 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Dsg3O35902 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dsg3O35902 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dsg3O35902 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dsg3O35902 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dsg3O35902 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Dsg3O35902 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Dsg3O35902 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Dsg3O35902 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dsg3O35902 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dsg3O35902 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dsg3O35902 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dsg3O35902 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Dsg3O35902 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.62■□□□□ 0.89
Dsg3O35902 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Dsg3O35902 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dsg3O35902 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Dsg3O35902 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dsg3O35902 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dsg3O35902 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Dsg3O35902 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dsg3O35902 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dsg3O35902 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Dsg3O35902 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Dsg3O35902 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dsg3O35902 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Dsg3O35902 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Dsg3O35902 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dsg3O35902 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dsg3O35902 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Dsg3O35902 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.6■□□□□ 0.89
Dsg3O35902 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Dsg3O35902 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dsg3O35902 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.6■□□□□ 0.89
Dsg3O35902 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dsg3O35902 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms