Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scamp3O35609 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scamp3O35609 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scamp3O35609 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.24■□□□□ 0.67
Scamp3O35609 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scamp3O35609 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scamp3O35609 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scamp3O35609 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scamp3O35609 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Scamp3O35609 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scamp3O35609 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.23■□□□□ 0.67
Scamp3O35609 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scamp3O35609 Gm8495-201ENSMUST00000188740 694 ntBASIC19.23■□□□□ 0.67
Scamp3O35609 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scamp3O35609 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scamp3O35609 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Scamp3O35609 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Scamp3O35609 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scamp3O35609 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scamp3O35609 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scamp3O35609 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Scamp3O35609 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.22■□□□□ 0.67
Scamp3O35609 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.22■□□□□ 0.67
Scamp3O35609 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
Scamp3O35609 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Scamp3O35609 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.22■□□□□ 0.67
Scamp3O35609 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Scamp3O35609 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp3O35609 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.22■□□□□ 0.67
Scamp3O35609 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
Scamp3O35609 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp3O35609 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp3O35609 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp3O35609 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp3O35609 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp3O35609 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp3O35609 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp3O35609 Iqck-206ENSMUST00000208658 2891 ntBASIC19.2■□□□□ 0.66
Scamp3O35609 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp3O35609 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.2■□□□□ 0.66
Scamp3O35609 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.2■□□□□ 0.66
Scamp3O35609 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.2■□□□□ 0.66
Scamp3O35609 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.2■□□□□ 0.66
Scamp3O35609 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.2■□□□□ 0.66
Scamp3O35609 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.2■□□□□ 0.66
Scamp3O35609 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.2■□□□□ 0.66
Scamp3O35609 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp3O35609 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp3O35609 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp3O35609 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Scamp3O35609 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Scamp3O35609 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Scamp3O35609 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.19■□□□□ 0.66
Scamp3O35609 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Scamp3O35609 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Scamp3O35609 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.19■□□□□ 0.66
Scamp3O35609 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp3O35609 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scamp3O35609 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.18■□□□□ 0.66
Scamp3O35609 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Scamp3O35609 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scamp3O35609 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scamp3O35609 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scamp3O35609 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.18■□□□□ 0.66
Scamp3O35609 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Scamp3O35609 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scamp3O35609 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.18■□□□□ 0.66
Scamp3O35609 Gm26571-201ENSMUST00000181399 666 ntBASIC19.18■□□□□ 0.66
Scamp3O35609 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.18■□□□□ 0.66
Scamp3O35609 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms