Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp35M0QWN7 Gm10849-201ENSMUST00000100397 618 ntBASIC20.72■□□□□ 0.91
Usp35M0QWN7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.72■□□□□ 0.91
Usp35M0QWN7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp35M0QWN7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp35M0QWN7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp35M0QWN7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.71■□□□□ 0.91
Usp35M0QWN7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp35M0QWN7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp35M0QWN7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp35M0QWN7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp35M0QWN7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp35M0QWN7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp35M0QWN7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp35M0QWN7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp35M0QWN7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.69■□□□□ 0.9
Usp35M0QWN7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp35M0QWN7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp35M0QWN7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp35M0QWN7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp35M0QWN7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp35M0QWN7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp35M0QWN7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp35M0QWN7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp35M0QWN7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Usp35M0QWN7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp35M0QWN7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp35M0QWN7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp35M0QWN7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp35M0QWN7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp35M0QWN7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp35M0QWN7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp35M0QWN7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp35M0QWN7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp35M0QWN7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp35M0QWN7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.67■□□□□ 0.9
Usp35M0QWN7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Usp35M0QWN7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp35M0QWN7 Gm18671-201ENSMUST00000214826 683 ntBASIC20.67■□□□□ 0.9
Usp35M0QWN7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.67■□□□□ 0.9
Usp35M0QWN7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.67■□□□□ 0.9
Usp35M0QWN7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp35M0QWN7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp35M0QWN7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.66■□□□□ 0.9
Usp35M0QWN7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp35M0QWN7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp35M0QWN7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp35M0QWN7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp35M0QWN7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp35M0QWN7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp35M0QWN7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp35M0QWN7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp35M0QWN7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp35M0QWN7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp35M0QWN7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.65■□□□□ 0.9
Usp35M0QWN7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp35M0QWN7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp35M0QWN7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp35M0QWN7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Usp35M0QWN7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Usp35M0QWN7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp35M0QWN7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.64■□□□□ 0.89
Usp35M0QWN7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Usp35M0QWN7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Usp35M0QWN7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp35M0QWN7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp35M0QWN7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Usp35M0QWN7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp35M0QWN7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp35M0QWN7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp35M0QWN7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp35M0QWN7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms