Protein–RNA interactions for Protein: E9PV82

Fam53a, Protein FAM53A, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53aE9PV82 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Fam53aE9PV82 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fam53aE9PV82 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Fam53aE9PV82 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam53aE9PV82 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam53aE9PV82 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam53aE9PV82 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Fam53aE9PV82 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam53aE9PV82 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Fam53aE9PV82 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam53aE9PV82 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam53aE9PV82 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Fam53aE9PV82 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam53aE9PV82 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam53aE9PV82 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam53aE9PV82 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.4■□□□□ 0.38
Fam53aE9PV82 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
Fam53aE9PV82 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam53aE9PV82 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.4■□□□□ 0.38
Fam53aE9PV82 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam53aE9PV82 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.4■□□□□ 0.38
Fam53aE9PV82 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Fam53aE9PV82 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Fam53aE9PV82 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam53aE9PV82 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam53aE9PV82 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam53aE9PV82 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.39■□□□□ 0.37
Fam53aE9PV82 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.39■□□□□ 0.37
Fam53aE9PV82 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.39■□□□□ 0.37
Fam53aE9PV82 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Fam53aE9PV82 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam53aE9PV82 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam53aE9PV82 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam53aE9PV82 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam53aE9PV82 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Fam53aE9PV82 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam53aE9PV82 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam53aE9PV82 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.38■□□□□ 0.37
Fam53aE9PV82 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Fam53aE9PV82 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam53aE9PV82 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam53aE9PV82 Gm9988-201ENSMUST00000069786 435 ntBASIC17.38■□□□□ 0.37
Fam53aE9PV82 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam53aE9PV82 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam53aE9PV82 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Fam53aE9PV82 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Fam53aE9PV82 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Fam53aE9PV82 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam53aE9PV82 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam53aE9PV82 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam53aE9PV82 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.37■□□□□ 0.37
Fam53aE9PV82 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam53aE9PV82 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam53aE9PV82 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Fam53aE9PV82 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam53aE9PV82 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam53aE9PV82 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Fam53aE9PV82 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam53aE9PV82 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Fam53aE9PV82 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam53aE9PV82 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam53aE9PV82 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam53aE9PV82 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam53aE9PV82 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Fam53aE9PV82 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam53aE9PV82 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam53aE9PV82 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Fam53aE9PV82 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Fam53aE9PV82 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam53aE9PV82 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Fam53aE9PV82 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Fam53aE9PV82 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Fam53aE9PV82 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam53aE9PV82 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam53aE9PV82 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.35■□□□□ 0.37
Fam53aE9PV82 Gm42642-201ENSMUST00000200683 355 ntBASIC17.35■□□□□ 0.37
Fam53aE9PV82 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Fam53aE9PV82 Reep4-203ENSMUST00000226563 1444 ntBASIC17.35■□□□□ 0.37
Fam53aE9PV82 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam53aE9PV82 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam53aE9PV82 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam53aE9PV82 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam53aE9PV82 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam53aE9PV82 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam53aE9PV82 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam53aE9PV82 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Fam53aE9PV82 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam53aE9PV82 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam53aE9PV82 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam53aE9PV82 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam53aE9PV82 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam53aE9PV82 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam53aE9PV82 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam53aE9PV82 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Fam53aE9PV82 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Fam53aE9PV82 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Fam53aE9PV82 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Fam53aE9PV82 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Fam53aE9PV82 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.33■□□□□ 0.37
Fam53aE9PV82 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms