Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmcn1D3YXG0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC5.73□□□□□ -1.49
Hmcn1D3YXG0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Arhgef4-208ENSMUST00000211073 171 ntBASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Gm7284-201ENSMUST00000131667 944 ntBASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmcn1D3YXG0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hmcn1D3YXG0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Hmcn1D3YXG0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hmcn1D3YXG0 Gm28033-201ENSMUST00000184224 96 ntBASIC5.71□□□□□ -1.49
Hmcn1D3YXG0 AC159205.6-201ENSMUST00000224935 887 ntBASIC5.71□□□□□ -1.49
Hmcn1D3YXG0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hmcn1D3YXG0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hmcn1D3YXG0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hmcn1D3YXG0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hmcn1D3YXG0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Hmcn1D3YXG0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hmcn1D3YXG0 Gm13559-201ENSMUST00000120476 863 ntBASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Gm2399-201ENSMUST00000104944 225 ntBASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Gm30025-201ENSMUST00000218555 728 ntBASIC5.71□□□□□ -1.5
Hmcn1D3YXG0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmcn1D3YXG0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms