Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Golgb1-201ENSMUST00000023534 498 ntBASIC17.71■□□□□ 0.43
Hist1h2acC0HKE2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hist1h2acC0HKE2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hist1h2acC0HKE2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hist1h2acC0HKE2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hist1h2acC0HKE2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h2acC0HKE2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.68■□□□□ 0.42
Hist1h2acC0HKE2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h2acC0HKE2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h2acC0HKE2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h2acC0HKE2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms