Protein–RNA interactions for Protein: A1L0T3

Ssc4d, Scavenger receptor cysteine-rich domain-containing group B protein, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc4dA1L0T3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssc4dA1L0T3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssc4dA1L0T3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Ssc4dA1L0T3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssc4dA1L0T3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ssc4dA1L0T3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ssc4dA1L0T3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ssc4dA1L0T3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.8■□□□□ 0.6
Ssc4dA1L0T3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssc4dA1L0T3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssc4dA1L0T3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.8■□□□□ 0.6
Ssc4dA1L0T3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.8■□□□□ 0.6
Ssc4dA1L0T3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssc4dA1L0T3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssc4dA1L0T3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssc4dA1L0T3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssc4dA1L0T3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Gm12933-201ENSMUST00000120203 872 ntBASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssc4dA1L0T3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ssc4dA1L0T3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssc4dA1L0T3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssc4dA1L0T3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ssc4dA1L0T3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssc4dA1L0T3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssc4dA1L0T3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssc4dA1L0T3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.77■□□□□ 0.6
Ssc4dA1L0T3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Ssc4dA1L0T3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.77■□□□□ 0.6
Ssc4dA1L0T3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.77■□□□□ 0.6
Ssc4dA1L0T3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ssc4dA1L0T3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ssc4dA1L0T3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ssc4dA1L0T3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssc4dA1L0T3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssc4dA1L0T3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.76■□□□□ 0.59
Ssc4dA1L0T3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ssc4dA1L0T3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Ssc4dA1L0T3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssc4dA1L0T3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssc4dA1L0T3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssc4dA1L0T3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ssc4dA1L0T3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ssc4dA1L0T3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssc4dA1L0T3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssc4dA1L0T3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ssc4dA1L0T3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.75■□□□□ 0.59
Ssc4dA1L0T3 Gm10602-201ENSMUST00000098239 609 ntBASIC18.75■□□□□ 0.59
Ssc4dA1L0T3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.75■□□□□ 0.59
Ssc4dA1L0T3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssc4dA1L0T3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.73■□□□□ 0.59
Ssc4dA1L0T3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ssc4dA1L0T3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssc4dA1L0T3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ssc4dA1L0T3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssc4dA1L0T3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssc4dA1L0T3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Ssc4dA1L0T3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssc4dA1L0T3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssc4dA1L0T3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssc4dA1L0T3 Gm13534-201ENSMUST00000121169 513 ntBASIC18.72■□□□□ 0.59
Ssc4dA1L0T3 Gm7860-201ENSMUST00000121190 879 ntBASIC18.72■□□□□ 0.59
Ssc4dA1L0T3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.72■□□□□ 0.59
Ssc4dA1L0T3 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.72■□□□□ 0.59
Ssc4dA1L0T3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.72■□□□□ 0.59
Ssc4dA1L0T3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ssc4dA1L0T3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssc4dA1L0T3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssc4dA1L0T3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssc4dA1L0T3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
Ssc4dA1L0T3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssc4dA1L0T3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssc4dA1L0T3 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.71■□□□□ 0.59
Ssc4dA1L0T3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ssc4dA1L0T3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Ssc4dA1L0T3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssc4dA1L0T3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms