Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav21-dv12A0A075B6C4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav21-dv12A0A075B6C4 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.88□□□□□ -0.03
Trav21-dv12A0A075B6C4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav21-dv12A0A075B6C4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav21-dv12A0A075B6C4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav21-dv12A0A075B6C4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav21-dv12A0A075B6C4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav21-dv12A0A075B6C4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav21-dv12A0A075B6C4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav21-dv12A0A075B6C4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav21-dv12A0A075B6C4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav21-dv12A0A075B6C4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav21-dv12A0A075B6C4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav21-dv12A0A075B6C4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav21-dv12A0A075B6C4 Golgb1-201ENSMUST00000023534 498 ntBASIC14.86□□□□□ -0.03
Trav21-dv12A0A075B6C4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav21-dv12A0A075B6C4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav21-dv12A0A075B6C4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav21-dv12A0A075B6C4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav21-dv12A0A075B6C4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav21-dv12A0A075B6C4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav21-dv12A0A075B6C4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav21-dv12A0A075B6C4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav21-dv12A0A075B6C4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav21-dv12A0A075B6C4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav21-dv12A0A075B6C4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trav21-dv12A0A075B6C4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav21-dv12A0A075B6C4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav21-dv12A0A075B6C4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav21-dv12A0A075B6C4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav21-dv12A0A075B6C4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav21-dv12A0A075B6C4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav21-dv12A0A075B6C4 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.83□□□□□ -0.03
Trav21-dv12A0A075B6C4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.83□□□□□ -0.04
Trav21-dv12A0A075B6C4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav21-dv12A0A075B6C4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms