Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC7.86□□□□□ -1.15
Hmgb3O54879 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Inpp5k-201ENSMUST00000006286 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Tbce-201ENSMUST00000039894 1844 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 B020018J22Rik-201ENSMUST00000223085 3223 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC7.86□□□□□ -1.15
Hmgb3O54879 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Gm15708-201ENSMUST00000156467 1765 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Gm7882-201ENSMUST00000177915 1762 ntBASIC7.86□□□□□ -1.15
Hmgb3O54879 Pparg-201ENSMUST00000000450 1767 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Scmh1-204ENSMUST00000106301 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Cyp2d22-201ENSMUST00000023083 2771 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Gm16023-201ENSMUST00000137752 2490 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Atg12-201ENSMUST00000035648 2492 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Pex12-201ENSMUST00000018877 2729 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Hmgb3O54879 Tnpo3-202ENSMUST00000115251 3989 ntTSL 5 BASIC7.86□□□□□ -1.15
Hmgb3O54879 Ifit1bl1-201ENSMUST00000112467 2193 ntAPPRIS P5 TSL 3 BASIC7.86□□□□□ -1.15
Hmgb3O54879 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmgb3O54879 Magt1-201ENSMUST00000033583 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Rtp1-201ENSMUST00000038730 3120 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 CT572998.1-201ENSMUST00000219636 1557 ntTSL 3 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm44992-210ENSMUST00000210126 1330 ntTSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Lipa-202ENSMUST00000178114 2965 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gpatch4-202ENSMUST00000166021 1768 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm42822-201ENSMUST00000200507 1529 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Tprkb-205ENSMUST00000113753 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm24470-201ENSMUST00000104486 132 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm15236-201ENSMUST00000117309 379 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm6322-201ENSMUST00000118789 1004 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm11451-201ENSMUST00000118946 630 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC7.85□□□□□ -1.15
Hmgb3O54879 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm28916-201ENSMUST00000186988 699 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm28833-201ENSMUST00000189671 559 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm43564-201ENSMUST00000196185 211 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm44953-201ENSMUST00000208745 1286 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm45410-201ENSMUST00000211331 1093 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Hmgb3O54879 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC7.85□□□□□ -1.15
Hmgb3O54879 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm9139-201ENSMUST00000218817 700 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm9257-201ENSMUST00000221254 232 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 AC141884.2-201ENSMUST00000228811 775 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Slc12a4-202ENSMUST00000116429 3755 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Olfml2b-201ENSMUST00000046792 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Mid1-205ENSMUST00000112105 3974 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Tulp2-204ENSMUST00000107759 1675 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm4880-201ENSMUST00000207645 1696 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Gm8314-201ENSMUST00000208964 1858 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Nuf2-201ENSMUST00000028000 2068 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 9230112E08Rik-202ENSMUST00000189441 3352 ntBASIC7.85□□□□□ -1.15
Hmgb3O54879 Slc25a30-201ENSMUST00000022580 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Sele-201ENSMUST00000027874 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Wdr48-205ENSMUST00000215307 3776 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Lpin1-205ENSMUST00000221297 3100 ntAPPRIS P4 TSL 5 BASIC7.85□□□□□ -1.15
Hmgb3O54879 Pkd2l1-201ENSMUST00000042026 3321 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Numb-204ENSMUST00000117217 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb3O54879 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Hmgb3O54879 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Ednrb-201ENSMUST00000022718 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Tert-201ENSMUST00000022104 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Akap14-201ENSMUST00000046557 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Exoc1-203ENSMUST00000113493 3371 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm32365-202ENSMUST00000220053 1749 ntTSL 5 BASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm6088-201ENSMUST00000117257 2539 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 148.4 ms