Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atp6v1c1Q9Z1G3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atp6v1c1Q9Z1G3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atp6v1c1Q9Z1G3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atp6v1c1Q9Z1G3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atp6v1c1Q9Z1G3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atp6v1c1Q9Z1G3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19■□□□□ 0.63
Atp6v1c1Q9Z1G3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atp6v1c1Q9Z1G3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atp6v1c1Q9Z1G3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atp6v1c1Q9Z1G3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atp6v1c1Q9Z1G3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19■□□□□ 0.63
Atp6v1c1Q9Z1G3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19■□□□□ 0.63
Atp6v1c1Q9Z1G3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atp6v1c1Q9Z1G3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.99■□□□□ 0.63
Atp6v1c1Q9Z1G3 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.99■□□□□ 0.63
Atp6v1c1Q9Z1G3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Atp6v1c1Q9Z1G3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Atp6v1c1Q9Z1G3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.99■□□□□ 0.63
Atp6v1c1Q9Z1G3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.99■□□□□ 0.63
Atp6v1c1Q9Z1G3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.99■□□□□ 0.63
Atp6v1c1Q9Z1G3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6v1c1Q9Z1G3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6v1c1Q9Z1G3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6v1c1Q9Z1G3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Atp6v1c1Q9Z1G3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atp6v1c1Q9Z1G3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.98■□□□□ 0.63
Atp6v1c1Q9Z1G3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.98■□□□□ 0.63
Atp6v1c1Q9Z1G3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Atp6v1c1Q9Z1G3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atp6v1c1Q9Z1G3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atp6v1c1Q9Z1G3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Atp6v1c1Q9Z1G3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Atp6v1c1Q9Z1G3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6v1c1Q9Z1G3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6v1c1Q9Z1G3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Atp6v1c1Q9Z1G3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atp6v1c1Q9Z1G3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atp6v1c1Q9Z1G3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atp6v1c1Q9Z1G3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atp6v1c1Q9Z1G3 Gm10399-202ENSMUST00000202768 748 ntBASIC18.95■□□□□ 0.62
Atp6v1c1Q9Z1G3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.95■□□□□ 0.62
Atp6v1c1Q9Z1G3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atp6v1c1Q9Z1G3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.95■□□□□ 0.62
Atp6v1c1Q9Z1G3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atp6v1c1Q9Z1G3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atp6v1c1Q9Z1G3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atp6v1c1Q9Z1G3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atp6v1c1Q9Z1G3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atp6v1c1Q9Z1G3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atp6v1c1Q9Z1G3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Atp6v1c1Q9Z1G3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atp6v1c1Q9Z1G3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atp6v1c1Q9Z1G3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Atp6v1c1Q9Z1G3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.93■□□□□ 0.62
Atp6v1c1Q9Z1G3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.93■□□□□ 0.62
Atp6v1c1Q9Z1G3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.93■□□□□ 0.62
Atp6v1c1Q9Z1G3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Atp6v1c1Q9Z1G3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.93■□□□□ 0.62
Atp6v1c1Q9Z1G3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms