Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn9Q9Z0S7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.7■□□□□ 0.58
Cldn9Q9Z0S7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cldn9Q9Z0S7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn9Q9Z0S7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn9Q9Z0S7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn9Q9Z0S7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.7■□□□□ 0.58
Cldn9Q9Z0S7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn9Q9Z0S7 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.7■□□□□ 0.58
Cldn9Q9Z0S7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Gm43137-201ENSMUST00000198052 594 ntBASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cldn9Q9Z0S7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn9Q9Z0S7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn9Q9Z0S7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Cldn9Q9Z0S7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.68■□□□□ 0.58
Cldn9Q9Z0S7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn9Q9Z0S7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.68■□□□□ 0.58
Cldn9Q9Z0S7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn9Q9Z0S7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.68■□□□□ 0.58
Cldn9Q9Z0S7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn9Q9Z0S7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn9Q9Z0S7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn9Q9Z0S7 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.68■□□□□ 0.58
Cldn9Q9Z0S7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn9Q9Z0S7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cldn9Q9Z0S7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn9Q9Z0S7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn9Q9Z0S7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn9Q9Z0S7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn9Q9Z0S7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn9Q9Z0S7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn9Q9Z0S7 Gm21956-201ENSMUST00000179946 522 ntBASIC18.66■□□□□ 0.58
Cldn9Q9Z0S7 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.66■□□□□ 0.58
Cldn9Q9Z0S7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.66■□□□□ 0.58
Cldn9Q9Z0S7 Spcs1-204ENSMUST00000226782 949 ntBASIC18.66■□□□□ 0.58
Cldn9Q9Z0S7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn9Q9Z0S7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn9Q9Z0S7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn9Q9Z0S7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn9Q9Z0S7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.65■□□□□ 0.58
Cldn9Q9Z0S7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.65■□□□□ 0.58
Cldn9Q9Z0S7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cldn9Q9Z0S7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn9Q9Z0S7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn9Q9Z0S7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn9Q9Z0S7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn9Q9Z0S7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Cldn9Q9Z0S7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn9Q9Z0S7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.64■□□□□ 0.57
Cldn9Q9Z0S7 Serp2-204ENSMUST00000228055 705 ntBASIC18.64■□□□□ 0.57
Cldn9Q9Z0S7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn9Q9Z0S7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn9Q9Z0S7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn9Q9Z0S7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Cldn9Q9Z0S7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn9Q9Z0S7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn9Q9Z0S7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn9Q9Z0S7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn9Q9Z0S7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn9Q9Z0S7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn9Q9Z0S7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn9Q9Z0S7 Iqck-206ENSMUST00000208658 2891 ntBASIC18.63■□□□□ 0.57
Cldn9Q9Z0S7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn9Q9Z0S7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn9Q9Z0S7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.63■□□□□ 0.57
Cldn9Q9Z0S7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn9Q9Z0S7 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.63■□□□□ 0.57
Cldn9Q9Z0S7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn9Q9Z0S7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cldn9Q9Z0S7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn9Q9Z0S7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Cldn9Q9Z0S7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn9Q9Z0S7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn9Q9Z0S7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn9Q9Z0S7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Cldn9Q9Z0S7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn9Q9Z0S7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn9Q9Z0S7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn9Q9Z0S7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn9Q9Z0S7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn9Q9Z0S7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn9Q9Z0S7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn9Q9Z0S7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn9Q9Z0S7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cldn9Q9Z0S7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn9Q9Z0S7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.61■□□□□ 0.57
Cldn9Q9Z0S7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Cldn9Q9Z0S7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn9Q9Z0S7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms