Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atp6ap1Q9R1Q9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atp6ap1Q9R1Q9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atp6ap1Q9R1Q9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atp6ap1Q9R1Q9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atp6ap1Q9R1Q9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atp6ap1Q9R1Q9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atp6ap1Q9R1Q9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Atp6ap1Q9R1Q9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atp6ap1Q9R1Q9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Atp6ap1Q9R1Q9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atp6ap1Q9R1Q9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.01■□□□□ 0.63
Atp6ap1Q9R1Q9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Atp6ap1Q9R1Q9 Serp2-204ENSMUST00000228055 705 ntBASIC19.01■□□□□ 0.63
Atp6ap1Q9R1Q9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atp6ap1Q9R1Q9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Atp6ap1Q9R1Q9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atp6ap1Q9R1Q9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Atp6ap1Q9R1Q9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atp6ap1Q9R1Q9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Atp6ap1Q9R1Q9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Smad6-203ENSMUST00000179458 273 ntBASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Gm43017-201ENSMUST00000198296 752 ntBASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19■□□□□ 0.63
Atp6ap1Q9R1Q9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atp6ap1Q9R1Q9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atp6ap1Q9R1Q9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atp6ap1Q9R1Q9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atp6ap1Q9R1Q9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Atp6ap1Q9R1Q9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
Atp6ap1Q9R1Q9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Atp6ap1Q9R1Q9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.98■□□□□ 0.63
Atp6ap1Q9R1Q9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atp6ap1Q9R1Q9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.98■□□□□ 0.63
Atp6ap1Q9R1Q9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atp6ap1Q9R1Q9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6ap1Q9R1Q9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6ap1Q9R1Q9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6ap1Q9R1Q9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6ap1Q9R1Q9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6ap1Q9R1Q9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6ap1Q9R1Q9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6ap1Q9R1Q9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6ap1Q9R1Q9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atp6ap1Q9R1Q9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.97■□□□□ 0.63
Atp6ap1Q9R1Q9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6ap1Q9R1Q9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6ap1Q9R1Q9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Atp6ap1Q9R1Q9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6ap1Q9R1Q9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6ap1Q9R1Q9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6ap1Q9R1Q9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.96■□□□□ 0.63
Atp6ap1Q9R1Q9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.96■□□□□ 0.63
Atp6ap1Q9R1Q9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Atp6ap1Q9R1Q9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atp6ap1Q9R1Q9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms