Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf4Q9QZS2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf4Q9QZS2 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.61■□□□□ 0.73
Rnf4Q9QZS2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf4Q9QZS2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf4Q9QZS2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf4Q9QZS2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf4Q9QZS2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf4Q9QZS2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rnf4Q9QZS2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Rnf4Q9QZS2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf4Q9QZS2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf4Q9QZS2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Gm14523-201ENSMUST00000117260 558 ntBASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf4Q9QZS2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf4Q9QZS2 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.59■□□□□ 0.73
Rnf4Q9QZS2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf4Q9QZS2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf4Q9QZS2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Rnf4Q9QZS2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf4Q9QZS2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf4Q9QZS2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf4Q9QZS2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf4Q9QZS2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf4Q9QZS2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf4Q9QZS2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Rnf4Q9QZS2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf4Q9QZS2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf4Q9QZS2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf4Q9QZS2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf4Q9QZS2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf4Q9QZS2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf4Q9QZS2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf4Q9QZS2 Gm27502-201ENSMUST00000183495 199 ntBASIC19.58■□□□□ 0.72
Rnf4Q9QZS2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf4Q9QZS2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf4Q9QZS2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf4Q9QZS2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Rnf4Q9QZS2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf4Q9QZS2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf4Q9QZS2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf4Q9QZS2 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.56■□□□□ 0.72
Rnf4Q9QZS2 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.56■□□□□ 0.72
Rnf4Q9QZS2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.56■□□□□ 0.72
Rnf4Q9QZS2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf4Q9QZS2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf4Q9QZS2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf4Q9QZS2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rnf4Q9QZS2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf4Q9QZS2 Mir6236-201ENSMUST00000184437 123 ntBASIC19.54■□□□□ 0.72
Rnf4Q9QZS2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.54■□□□□ 0.72
Rnf4Q9QZS2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rnf4Q9QZS2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf4Q9QZS2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms