Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shroom3Q9QXN0 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.59■□□□□ 0.73
Shroom3Q9QXN0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shroom3Q9QXN0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
Shroom3Q9QXN0 Gm43060-201ENSMUST00000200621 289 ntBASIC19.58■□□□□ 0.73
Shroom3Q9QXN0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.58■□□□□ 0.73
Shroom3Q9QXN0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.58■□□□□ 0.73
Shroom3Q9QXN0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shroom3Q9QXN0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shroom3Q9QXN0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shroom3Q9QXN0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Shroom3Q9QXN0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Shroom3Q9QXN0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.58■□□□□ 0.72
Shroom3Q9QXN0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shroom3Q9QXN0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shroom3Q9QXN0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Shroom3Q9QXN0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.57■□□□□ 0.72
Shroom3Q9QXN0 AA386476-201ENSMUST00000098781 1665 ntBASIC19.56■□□□□ 0.72
Shroom3Q9QXN0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.56■□□□□ 0.72
Shroom3Q9QXN0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Shroom3Q9QXN0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shroom3Q9QXN0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shroom3Q9QXN0 Gm42569-201ENSMUST00000200539 472 ntBASIC19.55■□□□□ 0.72
Shroom3Q9QXN0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shroom3Q9QXN0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shroom3Q9QXN0 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.55■□□□□ 0.72
Shroom3Q9QXN0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shroom3Q9QXN0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shroom3Q9QXN0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Shroom3Q9QXN0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shroom3Q9QXN0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Shroom3Q9QXN0 Gm10033-202ENSMUST00000211874 928 ntBASIC19.55■□□□□ 0.72
Shroom3Q9QXN0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Shroom3Q9QXN0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom3Q9QXN0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Shroom3Q9QXN0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom3Q9QXN0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom3Q9QXN0 Smad6-203ENSMUST00000179458 273 ntBASIC19.54■□□□□ 0.72
Shroom3Q9QXN0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom3Q9QXN0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom3Q9QXN0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom3Q9QXN0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom3Q9QXN0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom3Q9QXN0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.54■□□□□ 0.72
Shroom3Q9QXN0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom3Q9QXN0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom3Q9QXN0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom3Q9QXN0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom3Q9QXN0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom3Q9QXN0 Gm42642-201ENSMUST00000200683 355 ntBASIC19.53■□□□□ 0.72
Shroom3Q9QXN0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom3Q9QXN0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom3Q9QXN0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom3Q9QXN0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shroom3Q9QXN0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shroom3Q9QXN0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shroom3Q9QXN0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shroom3Q9QXN0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Shroom3Q9QXN0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Shroom3Q9QXN0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Shroom3Q9QXN0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Shroom3Q9QXN0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Shroom3Q9QXN0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Shroom3Q9QXN0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom3Q9QXN0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom3Q9QXN0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom3Q9QXN0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom3Q9QXN0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom3Q9QXN0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.51■□□□□ 0.71
Shroom3Q9QXN0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom3Q9QXN0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.51■□□□□ 0.71
Shroom3Q9QXN0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom3Q9QXN0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom3Q9QXN0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom3Q9QXN0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Shroom3Q9QXN0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom3Q9QXN0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom3Q9QXN0 Gm27011-201ENSMUST00000182352 972 ntBASIC19.5■□□□□ 0.71
Shroom3Q9QXN0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Shroom3Q9QXN0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom3Q9QXN0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom3Q9QXN0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom3Q9QXN0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom3Q9QXN0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom3Q9QXN0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms