Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tlr4Q9QUK6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Tlr4Q9QUK6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tlr4Q9QUK6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.1■□□□□ 0.65
Tlr4Q9QUK6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tlr4Q9QUK6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Gm10033-202ENSMUST00000211874 928 ntBASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr4Q9QUK6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Tlr4Q9QUK6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tlr4Q9QUK6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Tlr4Q9QUK6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tlr4Q9QUK6 Gm27405-201ENSMUST00000184201 112 ntBASIC19.08■□□□□ 0.64
Tlr4Q9QUK6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tlr4Q9QUK6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tlr4Q9QUK6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.08■□□□□ 0.64
Tlr4Q9QUK6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tlr4Q9QUK6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tlr4Q9QUK6 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr4Q9QUK6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr4Q9QUK6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Tlr4Q9QUK6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr4Q9QUK6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr4Q9QUK6 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.06■□□□□ 0.64
Tlr4Q9QUK6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.06■□□□□ 0.64
Tlr4Q9QUK6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Tlr4Q9QUK6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr4Q9QUK6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr4Q9QUK6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr4Q9QUK6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr4Q9QUK6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Tlr4Q9QUK6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Tlr4Q9QUK6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.05■□□□□ 0.64
Tlr4Q9QUK6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr4Q9QUK6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr4Q9QUK6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr4Q9QUK6 Gm42778-201ENSMUST00000199644 553 ntBASIC19.05■□□□□ 0.64
Tlr4Q9QUK6 Gm18671-201ENSMUST00000214826 683 ntBASIC19.05■□□□□ 0.64
Tlr4Q9QUK6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr4Q9QUK6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr4Q9QUK6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr4Q9QUK6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr4Q9QUK6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Tlr4Q9QUK6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Gm27801-201ENSMUST00000184174 223 ntBASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr4Q9QUK6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr4Q9QUK6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tlr4Q9QUK6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr4Q9QUK6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr4Q9QUK6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.03■□□□□ 0.64
Tlr4Q9QUK6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tlr4Q9QUK6 Gm9988-201ENSMUST00000069786 435 ntBASIC19.03■□□□□ 0.64
Tlr4Q9QUK6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr4Q9QUK6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tlr4Q9QUK6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr4Q9QUK6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.02■□□□□ 0.64
Tlr4Q9QUK6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr4Q9QUK6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr4Q9QUK6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr4Q9QUK6 AV356131-201ENSMUST00000206201 750 ntBASIC19.02■□□□□ 0.64
Tlr4Q9QUK6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms