Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tdp2Q9JJX7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.18■□□□□ 0.66
Tdp2Q9JJX7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Tdp2Q9JJX7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tdp2Q9JJX7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.18■□□□□ 0.66
Tdp2Q9JJX7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tdp2Q9JJX7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tdp2Q9JJX7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Tdp2Q9JJX7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tdp2Q9JJX7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tdp2Q9JJX7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tdp2Q9JJX7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Tdp2Q9JJX7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Tdp2Q9JJX7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.17■□□□□ 0.66
Tdp2Q9JJX7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tdp2Q9JJX7 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.17■□□□□ 0.66
Tdp2Q9JJX7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tdp2Q9JJX7 AA386476-201ENSMUST00000098781 1665 ntBASIC19.17■□□□□ 0.66
Tdp2Q9JJX7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tdp2Q9JJX7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tdp2Q9JJX7 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.16■□□□□ 0.66
Tdp2Q9JJX7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tdp2Q9JJX7 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.16■□□□□ 0.66
Tdp2Q9JJX7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tdp2Q9JJX7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tdp2Q9JJX7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tdp2Q9JJX7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tdp2Q9JJX7 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.16■□□□□ 0.66
Tdp2Q9JJX7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
Tdp2Q9JJX7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tdp2Q9JJX7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.15■□□□□ 0.66
Tdp2Q9JJX7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.15■□□□□ 0.66
Tdp2Q9JJX7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tdp2Q9JJX7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Tdp2Q9JJX7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tdp2Q9JJX7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Tdp2Q9JJX7 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.15■□□□□ 0.66
Tdp2Q9JJX7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tdp2Q9JJX7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tdp2Q9JJX7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tdp2Q9JJX7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tdp2Q9JJX7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tdp2Q9JJX7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tdp2Q9JJX7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tdp2Q9JJX7 Gm12821-201ENSMUST00000120022 600 ntBASIC19.14■□□□□ 0.65
Tdp2Q9JJX7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tdp2Q9JJX7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tdp2Q9JJX7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tdp2Q9JJX7 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.14■□□□□ 0.65
Tdp2Q9JJX7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tdp2Q9JJX7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tdp2Q9JJX7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tdp2Q9JJX7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tdp2Q9JJX7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tdp2Q9JJX7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tdp2Q9JJX7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
Tdp2Q9JJX7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tdp2Q9JJX7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tdp2Q9JJX7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tdp2Q9JJX7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tdp2Q9JJX7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.12■□□□□ 0.65
Tdp2Q9JJX7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Tdp2Q9JJX7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tdp2Q9JJX7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tdp2Q9JJX7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tdp2Q9JJX7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.12■□□□□ 0.65
Tdp2Q9JJX7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.12■□□□□ 0.65
Tdp2Q9JJX7 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.12■□□□□ 0.65
Tdp2Q9JJX7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tdp2Q9JJX7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tdp2Q9JJX7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tdp2Q9JJX7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tdp2Q9JJX7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tdp2Q9JJX7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tdp2Q9JJX7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tdp2Q9JJX7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tdp2Q9JJX7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tdp2Q9JJX7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Tdp2Q9JJX7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tdp2Q9JJX7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tdp2Q9JJX7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tdp2Q9JJX7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tdp2Q9JJX7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Tdp2Q9JJX7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tdp2Q9JJX7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.1■□□□□ 0.65
Tdp2Q9JJX7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tdp2Q9JJX7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms