Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Vps35Q9EQH3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps35Q9EQH3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps35Q9EQH3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps35Q9EQH3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps35Q9EQH3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.44■□□□□ 0.7
Vps35Q9EQH3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps35Q9EQH3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps35Q9EQH3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps35Q9EQH3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps35Q9EQH3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps35Q9EQH3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps35Q9EQH3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.43■□□□□ 0.7
Vps35Q9EQH3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps35Q9EQH3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.43■□□□□ 0.7
Vps35Q9EQH3 Gm43017-201ENSMUST00000198296 752 ntBASIC19.43■□□□□ 0.7
Vps35Q9EQH3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps35Q9EQH3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps35Q9EQH3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Vps35Q9EQH3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps35Q9EQH3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps35Q9EQH3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps35Q9EQH3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps35Q9EQH3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps35Q9EQH3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps35Q9EQH3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.42■□□□□ 0.7
Vps35Q9EQH3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps35Q9EQH3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Vps35Q9EQH3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps35Q9EQH3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps35Q9EQH3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps35Q9EQH3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Vps35Q9EQH3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps35Q9EQH3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps35Q9EQH3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.41■□□□□ 0.7
Vps35Q9EQH3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps35Q9EQH3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps35Q9EQH3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps35Q9EQH3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps35Q9EQH3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Serp2-204ENSMUST00000228055 705 ntBASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps35Q9EQH3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Smad6-203ENSMUST00000179458 273 ntBASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.39■□□□□ 0.69
Vps35Q9EQH3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps35Q9EQH3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Gm15039-201ENSMUST00000118914 875 ntBASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps35Q9EQH3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms