Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Smad6-203ENSMUST00000179458 273 ntBASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Nif3l1Q9EQ80 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nif3l1Q9EQ80 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nif3l1Q9EQ80 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nif3l1Q9EQ80 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nif3l1Q9EQ80 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nif3l1Q9EQ80 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nif3l1Q9EQ80 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nif3l1Q9EQ80 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nif3l1Q9EQ80 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Gm43017-201ENSMUST00000198296 752 ntBASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nif3l1Q9EQ80 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nif3l1Q9EQ80 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.28■□□□□ 0.68
Nif3l1Q9EQ80 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nif3l1Q9EQ80 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nif3l1Q9EQ80 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Nif3l1Q9EQ80 Gm11421-201ENSMUST00000122124 294 ntBASIC19.28■□□□□ 0.68
Nif3l1Q9EQ80 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nif3l1Q9EQ80 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nif3l1Q9EQ80 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nif3l1Q9EQ80 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nif3l1Q9EQ80 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nif3l1Q9EQ80 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nif3l1Q9EQ80 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nif3l1Q9EQ80 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.27■□□□□ 0.68
Nif3l1Q9EQ80 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nif3l1Q9EQ80 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nif3l1Q9EQ80 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nif3l1Q9EQ80 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nif3l1Q9EQ80 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nif3l1Q9EQ80 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nif3l1Q9EQ80 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nif3l1Q9EQ80 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nif3l1Q9EQ80 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nif3l1Q9EQ80 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nif3l1Q9EQ80 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nif3l1Q9EQ80 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nif3l1Q9EQ80 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.26■□□□□ 0.67
Nif3l1Q9EQ80 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.26■□□□□ 0.67
Nif3l1Q9EQ80 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nif3l1Q9EQ80 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nif3l1Q9EQ80 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.26■□□□□ 0.67
Nif3l1Q9EQ80 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nif3l1Q9EQ80 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nif3l1Q9EQ80 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nif3l1Q9EQ80 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nif3l1Q9EQ80 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nif3l1Q9EQ80 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nif3l1Q9EQ80 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nif3l1Q9EQ80 Gm26833-201ENSMUST00000180899 440 ntBASIC19.25■□□□□ 0.67
Nif3l1Q9EQ80 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nif3l1Q9EQ80 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nif3l1Q9EQ80 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nif3l1Q9EQ80 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.24■□□□□ 0.67
Nif3l1Q9EQ80 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms