Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf3c6Q9D8P7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf3c6Q9D8P7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf3c6Q9D8P7 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.73■□□□□ 0.91
Gtf3c6Q9D8P7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf3c6Q9D8P7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.73■□□□□ 0.91
Gtf3c6Q9D8P7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Gm5421-201ENSMUST00000181698 2354 ntBASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Gtf3c6Q9D8P7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf3c6Q9D8P7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf3c6Q9D8P7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf3c6Q9D8P7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Gtf3c6Q9D8P7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.71■□□□□ 0.91
Gtf3c6Q9D8P7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Gtf3c6Q9D8P7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.71■□□□□ 0.91
Gtf3c6Q9D8P7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf3c6Q9D8P7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf3c6Q9D8P7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf3c6Q9D8P7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Gtf3c6Q9D8P7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Gtf3c6Q9D8P7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Gtf3c6Q9D8P7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf3c6Q9D8P7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf3c6Q9D8P7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.7■□□□□ 0.9
Gtf3c6Q9D8P7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf3c6Q9D8P7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf3c6Q9D8P7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf3c6Q9D8P7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf3c6Q9D8P7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Gtf3c6Q9D8P7 Gm12251-201ENSMUST00000117893 792 ntBASIC20.69■□□□□ 0.9
Gtf3c6Q9D8P7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.69■□□□□ 0.9
Gtf3c6Q9D8P7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf3c6Q9D8P7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf3c6Q9D8P7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Gtf3c6Q9D8P7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf3c6Q9D8P7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf3c6Q9D8P7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf3c6Q9D8P7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Gtf3c6Q9D8P7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf3c6Q9D8P7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf3c6Q9D8P7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c6Q9D8P7 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.68■□□□□ 0.9
Gtf3c6Q9D8P7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.68■□□□□ 0.9
Gtf3c6Q9D8P7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c6Q9D8P7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.68■□□□□ 0.9
Gtf3c6Q9D8P7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.68■□□□□ 0.9
Gtf3c6Q9D8P7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Gtf3c6Q9D8P7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Gtf3c6Q9D8P7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c6Q9D8P7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c6Q9D8P7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c6Q9D8P7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c6Q9D8P7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c6Q9D8P7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c6Q9D8P7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c6Q9D8P7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c6Q9D8P7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c6Q9D8P7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c6Q9D8P7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gtf3c6Q9D8P7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf3c6Q9D8P7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf3c6Q9D8P7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf3c6Q9D8P7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Gtf3c6Q9D8P7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf3c6Q9D8P7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c6Q9D8P7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Gtf3c6Q9D8P7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gtf3c6Q9D8P7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms