Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem54Q9D7S1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tmem54Q9D7S1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem54Q9D7S1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem54Q9D7S1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tmem54Q9D7S1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tmem54Q9D7S1 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.05■□□□□ 0.32
Tmem54Q9D7S1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tmem54Q9D7S1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.05■□□□□ 0.32
Tmem54Q9D7S1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tmem54Q9D7S1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tmem54Q9D7S1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tmem54Q9D7S1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tmem54Q9D7S1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tmem54Q9D7S1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tmem54Q9D7S1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Tmem54Q9D7S1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tmem54Q9D7S1 Notumos-201ENSMUST00000151998 2659 ntBASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Tmem54Q9D7S1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tmem54Q9D7S1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tmem54Q9D7S1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Tmem54Q9D7S1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tmem54Q9D7S1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tmem54Q9D7S1 Gm15039-201ENSMUST00000118914 875 ntBASIC17.02■□□□□ 0.32
Tmem54Q9D7S1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tmem54Q9D7S1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tmem54Q9D7S1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.02■□□□□ 0.32
Tmem54Q9D7S1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
Tmem54Q9D7S1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tmem54Q9D7S1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tmem54Q9D7S1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tmem54Q9D7S1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tmem54Q9D7S1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tmem54Q9D7S1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tmem54Q9D7S1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tmem54Q9D7S1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Tmem54Q9D7S1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.01■□□□□ 0.31
Tmem54Q9D7S1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Tmem54Q9D7S1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tmem54Q9D7S1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tmem54Q9D7S1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tmem54Q9D7S1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tmem54Q9D7S1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.01■□□□□ 0.31
Tmem54Q9D7S1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tmem54Q9D7S1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Tmem54Q9D7S1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Tmem54Q9D7S1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Tmem54Q9D7S1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tmem54Q9D7S1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tmem54Q9D7S1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tmem54Q9D7S1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tmem54Q9D7S1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tmem54Q9D7S1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms