Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.85■□□□□ 0.29
Hcfc1r1Q9CYQ5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcfc1r1Q9CYQ5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcfc1r1Q9CYQ5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcfc1r1Q9CYQ5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcfc1r1Q9CYQ5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcfc1r1Q9CYQ5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcfc1r1Q9CYQ5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcfc1r1Q9CYQ5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcfc1r1Q9CYQ5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcfc1r1Q9CYQ5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcfc1r1Q9CYQ5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.84■□□□□ 0.29
Hcfc1r1Q9CYQ5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hcfc1r1Q9CYQ5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hcfc1r1Q9CYQ5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hcfc1r1Q9CYQ5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.84■□□□□ 0.29
Hcfc1r1Q9CYQ5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.84■□□□□ 0.29
Hcfc1r1Q9CYQ5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.84■□□□□ 0.29
Hcfc1r1Q9CYQ5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcfc1r1Q9CYQ5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcfc1r1Q9CYQ5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Hcfc1r1Q9CYQ5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcfc1r1Q9CYQ5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcfc1r1Q9CYQ5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hcfc1r1Q9CYQ5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hcfc1r1Q9CYQ5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hcfc1r1Q9CYQ5 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.82■□□□□ 0.28
Hcfc1r1Q9CYQ5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcfc1r1Q9CYQ5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcfc1r1Q9CYQ5 BC021767-201ENSMUST00000126387 1716 ntBASIC16.82■□□□□ 0.28
Hcfc1r1Q9CYQ5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcfc1r1Q9CYQ5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcfc1r1Q9CYQ5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hcfc1r1Q9CYQ5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcfc1r1Q9CYQ5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcfc1r1Q9CYQ5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.8■□□□□ 0.28
Hcfc1r1Q9CYQ5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hcfc1r1Q9CYQ5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.8■□□□□ 0.28
Hcfc1r1Q9CYQ5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hcfc1r1Q9CYQ5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcfc1r1Q9CYQ5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcfc1r1Q9CYQ5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hcfc1r1Q9CYQ5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcfc1r1Q9CYQ5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcfc1r1Q9CYQ5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcfc1r1Q9CYQ5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Hcfc1r1Q9CYQ5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcfc1r1Q9CYQ5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.78■□□□□ 0.28
Hcfc1r1Q9CYQ5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.78■□□□□ 0.28
Hcfc1r1Q9CYQ5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hcfc1r1Q9CYQ5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hcfc1r1Q9CYQ5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcfc1r1Q9CYQ5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms