Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.91■□□□□ 0.62
Trim16Q99PP9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim16Q99PP9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim16Q99PP9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim16Q99PP9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim16Q99PP9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim16Q99PP9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trim16Q99PP9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim16Q99PP9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.9■□□□□ 0.62
Trim16Q99PP9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim16Q99PP9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim16Q99PP9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
Trim16Q99PP9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim16Q99PP9 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.9■□□□□ 0.62
Trim16Q99PP9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim16Q99PP9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim16Q99PP9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
Trim16Q99PP9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.89■□□□□ 0.61
Trim16Q99PP9 Mir6236-201ENSMUST00000184437 123 ntBASIC18.89■□□□□ 0.61
Trim16Q99PP9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.89■□□□□ 0.61
Trim16Q99PP9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Trim16Q99PP9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim16Q99PP9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim16Q99PP9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trim16Q99PP9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim16Q99PP9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trim16Q99PP9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim16Q99PP9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim16Q99PP9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim16Q99PP9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim16Q99PP9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.88■□□□□ 0.61
Trim16Q99PP9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.88■□□□□ 0.61
Trim16Q99PP9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim16Q99PP9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim16Q99PP9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim16Q99PP9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim16Q99PP9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim16Q99PP9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim16Q99PP9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim16Q99PP9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim16Q99PP9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim16Q99PP9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim16Q99PP9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim16Q99PP9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim16Q99PP9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim16Q99PP9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trim16Q99PP9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim16Q99PP9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim16Q99PP9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim16Q99PP9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim16Q99PP9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim16Q99PP9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim16Q99PP9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim16Q99PP9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim16Q99PP9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim16Q99PP9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim16Q99PP9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim16Q99PP9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.86■□□□□ 0.61
Trim16Q99PP9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim16Q99PP9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim16Q99PP9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim16Q99PP9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Trim16Q99PP9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Trim16Q99PP9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim16Q99PP9 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.84■□□□□ 0.61
Trim16Q99PP9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim16Q99PP9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim16Q99PP9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim16Q99PP9 Gm12821-201ENSMUST00000120022 600 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms