Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.01■□□□□ 0.79
Gtf2ird2Q99NI3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.01■□□□□ 0.79
Gtf2ird2Q99NI3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird2Q99NI3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird2Q99NI3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird2Q99NI3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird2Q99NI3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gtf2ird2Q99NI3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Gtf2ird2Q99NI3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20■□□□□ 0.79
Gtf2ird2Q99NI3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gtf2ird2Q99NI3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gtf2ird2Q99NI3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Gtf2ird2Q99NI3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Gtf2ird2Q99NI3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gtf2ird2Q99NI3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gtf2ird2Q99NI3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gtf2ird2Q99NI3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gtf2ird2Q99NI3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gtf2ird2Q99NI3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.99■□□□□ 0.79
Gtf2ird2Q99NI3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.99■□□□□ 0.79
Gtf2ird2Q99NI3 Gm5874-201ENSMUST00000096101 508 ntBASIC19.99■□□□□ 0.79
Gtf2ird2Q99NI3 Gm10493-201ENSMUST00000097270 612 ntBASIC19.99■□□□□ 0.79
Gtf2ird2Q99NI3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gtf2ird2Q99NI3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gtf2ird2Q99NI3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gtf2ird2Q99NI3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.99■□□□□ 0.79
Gtf2ird2Q99NI3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Gtf2ird2Q99NI3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.97■□□□□ 0.79
Gtf2ird2Q99NI3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Gtf2ird2Q99NI3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Gtf2ird2Q99NI3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.97■□□□□ 0.79
Gtf2ird2Q99NI3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gtf2ird2Q99NI3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gtf2ird2Q99NI3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gtf2ird2Q99NI3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Gtf2ird2Q99NI3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gtf2ird2Q99NI3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.96■□□□□ 0.79
Gtf2ird2Q99NI3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.96■□□□□ 0.79
Gtf2ird2Q99NI3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gtf2ird2Q99NI3 Gm27801-201ENSMUST00000184174 223 ntBASIC19.96■□□□□ 0.79
Gtf2ird2Q99NI3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gtf2ird2Q99NI3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gtf2ird2Q99NI3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gtf2ird2Q99NI3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gtf2ird2Q99NI3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.94■□□□□ 0.78
Gtf2ird2Q99NI3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gtf2ird2Q99NI3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.93■□□□□ 0.78
Gtf2ird2Q99NI3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gtf2ird2Q99NI3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gtf2ird2Q99NI3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gtf2ird2Q99NI3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gtf2ird2Q99NI3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gtf2ird2Q99NI3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gtf2ird2Q99NI3 AA386476-201ENSMUST00000098781 1665 ntBASIC19.93■□□□□ 0.78
Gtf2ird2Q99NI3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gtf2ird2Q99NI3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gtf2ird2Q99NI3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Gtf2ird2Q99NI3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gtf2ird2Q99NI3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gtf2ird2Q99NI3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gtf2ird2Q99NI3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gtf2ird2Q99NI3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.92■□□□□ 0.78
Gtf2ird2Q99NI3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gtf2ird2Q99NI3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms