Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Tpgs1Q99MS8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpgs1Q99MS8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpgs1Q99MS8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Tpgs1Q99MS8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpgs1Q99MS8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpgs1Q99MS8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpgs1Q99MS8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.36■□□□□ 0.85
Tpgs1Q99MS8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpgs1Q99MS8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpgs1Q99MS8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Tpgs1Q99MS8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpgs1Q99MS8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Tpgs1Q99MS8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tpgs1Q99MS8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tpgs1Q99MS8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpgs1Q99MS8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Tpgs1Q99MS8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Tpgs1Q99MS8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.35■□□□□ 0.85
Tpgs1Q99MS8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpgs1Q99MS8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpgs1Q99MS8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tpgs1Q99MS8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tpgs1Q99MS8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.34■□□□□ 0.85
Tpgs1Q99MS8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Tpgs1Q99MS8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tpgs1Q99MS8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpgs1Q99MS8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpgs1Q99MS8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpgs1Q99MS8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Tpgs1Q99MS8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpgs1Q99MS8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpgs1Q99MS8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Tpgs1Q99MS8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.33■□□□□ 0.85
Tpgs1Q99MS8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Tpgs1Q99MS8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Tpgs1Q99MS8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tpgs1Q99MS8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tpgs1Q99MS8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tpgs1Q99MS8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Tpgs1Q99MS8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpgs1Q99MS8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tpgs1Q99MS8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tpgs1Q99MS8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpgs1Q99MS8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpgs1Q99MS8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpgs1Q99MS8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.31■□□□□ 0.84
Tpgs1Q99MS8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.31■□□□□ 0.84
Tpgs1Q99MS8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.31■□□□□ 0.84
Tpgs1Q99MS8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tpgs1Q99MS8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tpgs1Q99MS8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Tpgs1Q99MS8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tpgs1Q99MS8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.3■□□□□ 0.84
Tpgs1Q99MS8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tpgs1Q99MS8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.3■□□□□ 0.84
Tpgs1Q99MS8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Tpgs1Q99MS8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.3■□□□□ 0.84
Tpgs1Q99MS8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Tpgs1Q99MS8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tpgs1Q99MS8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tpgs1Q99MS8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpgs1Q99MS8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpgs1Q99MS8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.29■□□□□ 0.84
Tpgs1Q99MS8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpgs1Q99MS8 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.29■□□□□ 0.84
Tpgs1Q99MS8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpgs1Q99MS8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpgs1Q99MS8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpgs1Q99MS8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpgs1Q99MS8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpgs1Q99MS8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpgs1Q99MS8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpgs1Q99MS8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tpgs1Q99MS8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.28■□□□□ 0.84
Tpgs1Q99MS8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.28■□□□□ 0.84
Tpgs1Q99MS8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.28■□□□□ 0.84
Tpgs1Q99MS8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpgs1Q99MS8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tpgs1Q99MS8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpgs1Q99MS8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpgs1Q99MS8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tpgs1Q99MS8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tpgs1Q99MS8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Tpgs1Q99MS8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Tpgs1Q99MS8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.27■□□□□ 0.84
Tpgs1Q99MS8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.27■□□□□ 0.84
Tpgs1Q99MS8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Tpgs1Q99MS8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tpgs1Q99MS8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tpgs1Q99MS8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tpgs1Q99MS8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Tpgs1Q99MS8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tpgs1Q99MS8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Tpgs1Q99MS8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Tpgs1Q99MS8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Tpgs1Q99MS8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tpgs1Q99MS8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tpgs1Q99MS8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpgs1Q99MS8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms