Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha1Q91Y21 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdha1Q91Y21 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha1Q91Y21 Gm27405-201ENSMUST00000184201 112 ntBASIC20.35■□□□□ 0.85
Pcdha1Q91Y21 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.35■□□□□ 0.85
Pcdha1Q91Y21 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha1Q91Y21 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdha1Q91Y21 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdha1Q91Y21 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha1Q91Y21 Gm10033-202ENSMUST00000211874 928 ntBASIC20.34■□□□□ 0.85
Pcdha1Q91Y21 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha1Q91Y21 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdha1Q91Y21 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha1Q91Y21 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha1Q91Y21 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha1Q91Y21 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha1Q91Y21 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Pcdha1Q91Y21 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha1Q91Y21 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha1Q91Y21 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha1Q91Y21 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha1Q91Y21 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.33■□□□□ 0.85
Pcdha1Q91Y21 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha1Q91Y21 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdha1Q91Y21 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Pcdha1Q91Y21 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdha1Q91Y21 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdha1Q91Y21 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha1Q91Y21 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdha1Q91Y21 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha1Q91Y21 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha1Q91Y21 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha1Q91Y21 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.32■□□□□ 0.84
Pcdha1Q91Y21 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdha1Q91Y21 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Pcdha1Q91Y21 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha1Q91Y21 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdha1Q91Y21 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha1Q91Y21 Notumos-201ENSMUST00000151998 2659 ntBASIC20.31■□□□□ 0.84
Pcdha1Q91Y21 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pcdha1Q91Y21 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha1Q91Y21 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha1Q91Y21 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha1Q91Y21 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha1Q91Y21 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha1Q91Y21 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pcdha1Q91Y21 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha1Q91Y21 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pcdha1Q91Y21 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha1Q91Y21 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pcdha1Q91Y21 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha1Q91Y21 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.29■□□□□ 0.84
Pcdha1Q91Y21 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha1Q91Y21 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pcdha1Q91Y21 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.29■□□□□ 0.84
Pcdha1Q91Y21 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdha1Q91Y21 Gm18671-201ENSMUST00000214826 683 ntBASIC20.29■□□□□ 0.84
Pcdha1Q91Y21 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdha1Q91Y21 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha1Q91Y21 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha1Q91Y21 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha1Q91Y21 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha1Q91Y21 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha1Q91Y21 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.28■□□□□ 0.84
Pcdha1Q91Y21 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdha1Q91Y21 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha1Q91Y21 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.27■□□□□ 0.84
Pcdha1Q91Y21 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.27■□□□□ 0.84
Pcdha1Q91Y21 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.27■□□□□ 0.84
Pcdha1Q91Y21 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha1Q91Y21 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha1Q91Y21 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha1Q91Y21 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdha1Q91Y21 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha1Q91Y21 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.27■□□□□ 0.83
Pcdha1Q91Y21 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdha1Q91Y21 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdha1Q91Y21 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdha1Q91Y21 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdha1Q91Y21 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdha1Q91Y21 Gm27801-201ENSMUST00000184174 223 ntBASIC20.26■□□□□ 0.83
Pcdha1Q91Y21 Gm42778-201ENSMUST00000199644 553 ntBASIC20.26■□□□□ 0.83
Pcdha1Q91Y21 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdha1Q91Y21 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha1Q91Y21 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdha1Q91Y21 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdha1Q91Y21 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha1Q91Y21 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha1Q91Y21 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha1Q91Y21 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha1Q91Y21 AV356131-201ENSMUST00000206201 750 ntBASIC20.25■□□□□ 0.83
Pcdha1Q91Y21 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha1Q91Y21 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha1Q91Y21 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha1Q91Y21 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdha1Q91Y21 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha1Q91Y21 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha1Q91Y21 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha1Q91Y21 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms