Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.35■□□□□ 0.85
Pcdha3Q91Y16 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.35■□□□□ 0.85
Pcdha3Q91Y16 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha3Q91Y16 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha3Q91Y16 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdha3Q91Y16 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdha3Q91Y16 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha3Q91Y16 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha3Q91Y16 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pcdha3Q91Y16 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.33■□□□□ 0.85
Pcdha3Q91Y16 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha3Q91Y16 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha3Q91Y16 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.33■□□□□ 0.85
Pcdha3Q91Y16 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.33■□□□□ 0.84
Pcdha3Q91Y16 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcdha3Q91Y16 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdha3Q91Y16 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.33■□□□□ 0.84
Pcdha3Q91Y16 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha3Q91Y16 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha3Q91Y16 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha3Q91Y16 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha3Q91Y16 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha3Q91Y16 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha3Q91Y16 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha3Q91Y16 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.31■□□□□ 0.84
Pcdha3Q91Y16 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Pcdha3Q91Y16 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Pcdha3Q91Y16 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha3Q91Y16 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha3Q91Y16 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha3Q91Y16 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha3Q91Y16 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha3Q91Y16 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha3Q91Y16 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha3Q91Y16 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha3Q91Y16 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
Pcdha3Q91Y16 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdha3Q91Y16 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha3Q91Y16 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Pcdha3Q91Y16 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha3Q91Y16 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha3Q91Y16 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdha3Q91Y16 Gm26833-201ENSMUST00000180899 440 ntBASIC20.28■□□□□ 0.84
Pcdha3Q91Y16 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.28■□□□□ 0.84
Pcdha3Q91Y16 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdha3Q91Y16 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha3Q91Y16 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha3Q91Y16 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha3Q91Y16 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha3Q91Y16 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdha3Q91Y16 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha3Q91Y16 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdha3Q91Y16 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdha3Q91Y16 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms