Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha9Q91Y11 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha9Q91Y11 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha9Q91Y11 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha9Q91Y11 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdha9Q91Y11 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha9Q91Y11 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha9Q91Y11 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.75■□□□□ 0.91
Pcdha9Q91Y11 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha9Q91Y11 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha9Q91Y11 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.74■□□□□ 0.91
Pcdha9Q91Y11 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.74■□□□□ 0.91
Pcdha9Q91Y11 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdha9Q91Y11 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha9Q91Y11 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha9Q91Y11 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha9Q91Y11 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Pcdha9Q91Y11 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pcdha9Q91Y11 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha9Q91Y11 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdha9Q91Y11 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha9Q91Y11 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha9Q91Y11 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha9Q91Y11 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha9Q91Y11 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha9Q91Y11 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha9Q91Y11 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha9Q91Y11 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha9Q91Y11 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha9Q91Y11 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha9Q91Y11 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Pcdha9Q91Y11 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.72■□□□□ 0.91
Pcdha9Q91Y11 Gm43060-201ENSMUST00000200621 289 ntBASIC20.72■□□□□ 0.91
Pcdha9Q91Y11 Gm40848-201ENSMUST00000221998 324 ntBASIC20.72■□□□□ 0.91
Pcdha9Q91Y11 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha9Q91Y11 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha9Q91Y11 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha9Q91Y11 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcdha9Q91Y11 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha9Q91Y11 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pcdha9Q91Y11 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcdha9Q91Y11 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha9Q91Y11 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha9Q91Y11 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdha9Q91Y11 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha9Q91Y11 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdha9Q91Y11 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdha9Q91Y11 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha9Q91Y11 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha9Q91Y11 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha9Q91Y11 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha9Q91Y11 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha9Q91Y11 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha9Q91Y11 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pcdha9Q91Y11 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.7■□□□□ 0.9
Pcdha9Q91Y11 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha9Q91Y11 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha9Q91Y11 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha9Q91Y11 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha9Q91Y11 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Pcdha9Q91Y11 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdha9Q91Y11 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha9Q91Y11 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha9Q91Y11 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha9Q91Y11 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha9Q91Y11 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha9Q91Y11 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha9Q91Y11 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdha9Q91Y11 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdha9Q91Y11 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha9Q91Y11 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.68■□□□□ 0.9
Pcdha9Q91Y11 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.68■□□□□ 0.9
Pcdha9Q91Y11 Gm27801-201ENSMUST00000184174 223 ntBASIC20.68■□□□□ 0.9
Pcdha9Q91Y11 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha9Q91Y11 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha9Q91Y11 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha9Q91Y11 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha9Q91Y11 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha9Q91Y11 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha9Q91Y11 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.67■□□□□ 0.9
Pcdha9Q91Y11 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha9Q91Y11 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Pcdha9Q91Y11 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.67■□□□□ 0.9
Pcdha9Q91Y11 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdha9Q91Y11 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.67■□□□□ 0.9
Pcdha9Q91Y11 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha9Q91Y11 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha9Q91Y11 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdha9Q91Y11 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha9Q91Y11 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms