Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 Notumos-201ENSMUST00000151998 2659 ntBASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.68■□□□□ 0.58
Pcdhb20Q91XZ9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb20Q91XZ9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.67■□□□□ 0.58
Pcdhb20Q91XZ9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb20Q91XZ9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb20Q91XZ9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhb20Q91XZ9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb20Q91XZ9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Pcdhb20Q91XZ9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb20Q91XZ9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb20Q91XZ9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb20Q91XZ9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb20Q91XZ9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb20Q91XZ9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhb20Q91XZ9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb20Q91XZ9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb20Q91XZ9 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.65■□□□□ 0.58
Pcdhb20Q91XZ9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhb20Q91XZ9 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.65■□□□□ 0.58
Pcdhb20Q91XZ9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb20Q91XZ9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb20Q91XZ9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb20Q91XZ9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.65■□□□□ 0.58
Pcdhb20Q91XZ9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb20Q91XZ9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb20Q91XZ9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb20Q91XZ9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb20Q91XZ9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhb20Q91XZ9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb20Q91XZ9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.64■□□□□ 0.57
Pcdhb20Q91XZ9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb20Q91XZ9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb20Q91XZ9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb20Q91XZ9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb20Q91XZ9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb20Q91XZ9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb20Q91XZ9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb20Q91XZ9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Gm42778-201ENSMUST00000199644 553 ntBASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb20Q91XZ9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Gm42642-201ENSMUST00000200683 355 ntBASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb20Q91XZ9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb20Q91XZ9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb20Q91XZ9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb20Q91XZ9 Gm9988-201ENSMUST00000069786 435 ntBASIC18.61■□□□□ 0.57
Pcdhb20Q91XZ9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb20Q91XZ9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb20Q91XZ9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb20Q91XZ9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Gm21156-201ENSMUST00000189693 869 ntBASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Gm44882-201ENSMUST00000205702 802 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms