Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb4Q91XX6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb4Q91XX6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb4Q91XX6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb4Q91XX6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb4Q91XX6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb4Q91XX6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb4Q91XX6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb4Q91XX6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb4Q91XX6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhgb4Q91XX6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb4Q91XX6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb4Q91XX6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb4Q91XX6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb4Q91XX6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb4Q91XX6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdhgb4Q91XX6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb4Q91XX6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb4Q91XX6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Pcdhgb4Q91XX6 Gm43137-201ENSMUST00000198052 594 ntBASIC20.52■□□□□ 0.88
Pcdhgb4Q91XX6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb4Q91XX6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb4Q91XX6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb4Q91XX6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhgb4Q91XX6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb4Q91XX6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhgb4Q91XX6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhgb4Q91XX6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb4Q91XX6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb4Q91XX6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhgb4Q91XX6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb4Q91XX6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb4Q91XX6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb4Q91XX6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb4Q91XX6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.51■□□□□ 0.87
Pcdhgb4Q91XX6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb4Q91XX6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb4Q91XX6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb4Q91XX6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhgb4Q91XX6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhgb4Q91XX6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhgb4Q91XX6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhgb4Q91XX6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhgb4Q91XX6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdhgb4Q91XX6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb4Q91XX6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhgb4Q91XX6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb4Q91XX6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb4Q91XX6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhgb4Q91XX6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb4Q91XX6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb4Q91XX6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhgb4Q91XX6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdhgb4Q91XX6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb4Q91XX6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb4Q91XX6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb4Q91XX6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb4Q91XX6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdhgb4Q91XX6 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.48■□□□□ 0.87
Pcdhgb4Q91XX6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb4Q91XX6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhgb4Q91XX6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb4Q91XX6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb4Q91XX6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms